Email l.a.kelley@imperial.ac.uk Description P09372 Date Thu Jan 5 11:02:14 GMT 2012 Unique Job ID e9a78d7db4044ef4

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1dkgB_ 100.0 99 PDB header:complex (hsp24/hsp70) Chain: B: PDB Molecule:nucleotide exchange factor grpe; PDBTitle: crystal structure of the nucleotide exchange factor grpe2 bound to the atpase domain of the molecular chaperone dnak 2 c3a6mB_ 100.0 27 PDB header:chaperone Chain: B: PDB Molecule:protein grpe; PDBTitle: crystal structure of grpe from thermus thermophilus hb8 3 d1dkga1 99.8 100 Fold:Head domain of nucleotide exchange factor GrpE Superfamily:Head domain of nucleotide exchange factor GrpE Family:Head domain of nucleotide exchange factor GrpE 4 c3hl6B_ 27.8 22 PDB header:unknown function Chain: B: PDB Molecule:pathogenicity island protein; PDBTitle: staphylococcus aureus pathogenicity island 3 orf9 protein 5 c3swfA_ 21.8 15 PDB header:transport protein Chain: A: PDB Molecule:cgmp-gated cation channel alpha-1; PDBTitle: cnga1 621-690 containing clz domain 6 d1rsoa_ 19.6 14 Fold:L27 domain Superfamily:L27 domain Family:L27 domain 7 d1nzea_ 18.8 18 Fold:Four-helical up-and-down bundle Superfamily:Oxygen-evolving enhancer protein 3, Family:Oxygen-evolving enhancer protein 3, 8 c1nzeA_ 18.8 18 PDB header:oxidoreductase Chain: A: PDB Molecule:oxygen-evolving enhancer protein 3; PDBTitle: crystal structure of psbq polypeptide of photosystem ii2 from higher plants 9 d1x5ta1 16.4 19 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 10 c2jvoA_ 15.0 22 PDB header:rna binding protein Chain: A: PDB Molecule:nucleolar protein 3; PDBTitle: segmental isotope labeling of npl3 11 c1w5fA_ 14.9 5 PDB header:cell division Chain: A: PDB Molecule:cell division protein ftsz; PDBTitle: ftsz, t7 mutated, domain swapped (t. maritima) 12 d2cpia1 14.4 33 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 13 c3e7lD_ 14.2 15 PDB header:transcription regulator Chain: D: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain 14 c3mkxC_ 14.1 21 PDB header:antiviral protein Chain: C: PDB Molecule:bone marrow stromal antigen 2; PDBTitle: crystal structure of bst2/tetherin 15 d1fnxh1 14.0 14 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 16 d2cbia1 13.5 16 Fold:Hyaluronidase domain-like Superfamily:Hyaluronidase post-catalytic domain-like Family:Hyaluronidase post-catalytic domain-like 17 d1rk8a_ 13.4 15 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 18 d1wi8a_ 13.1 17 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 19 d1etxa_ 12.6 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 20 d2choa1 12.6 10 Fold:Hyaluronidase domain-like Superfamily:Hyaluronidase post-catalytic domain-like Family:Hyaluronidase post-catalytic domain-like 21 d2qeec1 not modelled 11.6 19 Fold:TIM beta/alpha-barrel Superfamily:Metallo-dependent hydrolases Family:Uronate isomerase-like 22 d1w5fa2 not modelled 11.3 5 Fold:Bacillus chorismate mutase-like Superfamily:Tubulin C-terminal domain-like Family:Tubulin, C-terminal domain 23 d1ntca_ not modelled 11.0 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 24 d1ttea1 not modelled 10.7 22 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 25 c3bs9A_ not modelled 10.6 17 PDB header:rna binding protein Chain: A: PDB Molecule:nucleolysin tia-1 isoform p40; PDBTitle: x-ray structure of human tia-1 rrm2 26 d2j01s1 not modelled 9.8 30 Fold:Ribonuclease H-like motif Superfamily:Translational machinery components Family:Ribosomal protein L18 and S11 27 c3lraA_ not modelled 9.5 16 PDB header:membrane protein Chain: A: PDB Molecule:disks large homolog 1, maguk p55 subfamily member 7, PDBTitle: structural basis for assembling a human tripartite complex dlg1-mpp7-2 mals3 28 d2cqca1 not modelled 9.5 21 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 29 d1we1a_ not modelled 9.1 6 Fold:Heme oxygenase-like Superfamily:Heme oxygenase-like Family:Eukaryotic type heme oxygenase 30 c3he5A_ not modelled 9.0 24 PDB header:de novo protein Chain: A: PDB Molecule:synzip1; PDBTitle: heterospecific coiled-coil pair synzip2:synzip1 31 c2x7aB_ not modelled 8.8 21 PDB header:immune system Chain: B: PDB Molecule:bone marrow stromal antigen 2; PDBTitle: structural basis of hiv-1 tethering to membranes by the2 bst2-tetherin ectodomain 32 d1fxla1 not modelled 8.6 13 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 33 d1pzqa_ not modelled 8.6 25 Fold:Dimerisation interlock Superfamily:Docking domain A of the erythromycin polyketide synthase (DEBS) Family:Docking domain A of the erythromycin polyketide synthase (DEBS) 34 c1zvuA_ not modelled 8.5 23 PDB header:isomerase Chain: A: PDB Molecule:topoisomerase iv subunit a; PDBTitle: structure of the full-length e. coli parc subunit 35 c3movB_ not modelled 7.8 17 PDB header:structural protein Chain: B: PDB Molecule:lamin-b1; PDBTitle: crystal structure of human lamin-b1 coil 2 segment 36 c2jl8S_ not modelled 7.8 30 PDB header:ribosome Chain: S: PDB Molecule:50s ribosomal protein l18; PDBTitle: insights into translational termination from the structure2 of rf2 bound to the ribosome (part 4 of 4).3 this file contains the 50s subunit. 37 d2d6fa1 not modelled 7.6 10 Fold:Sm-like fold Superfamily:GatD N-terminal domain-like Family:GatD N-terminal domain-like 38 c3q9vB_ not modelled 7.5 29 PDB header:dna binding protein Chain: B: PDB Molecule:dna-binding response regulator; PDBTitle: crystal structure of rra c-terminal domain(123-221) from deinococcus2 radiodurans 39 c3m9bK_ not modelled 7.4 11 PDB header:chaperone Chain: K: PDB Molecule:proteasome-associated atpase; PDBTitle: crystal structure of the amino terminal coiled coil domain and the2 inter domain of the mycobacterium tuberculosis proteasomal atpase mpa 40 d1h2vz_ not modelled 7.3 15 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 41 c3md1B_ not modelled 7.1 13 PDB header:rna binding protein Chain: B: PDB Molecule:nuclear and cytoplasmic polyadenylated rna-binding protein PDBTitle: crystal structure of the second rrm domain of yeast poly(u)-binding2 protein (pub1) 42 d1igub_ not modelled 7.0 10 Fold:SH3-like barrel Superfamily:C-terminal domain of transcriptional repressors Family:Transcriptional repressor protein KorB 43 d1fipa_ not modelled 6.9 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 44 d1tafa_ not modelled 6.7 7 Fold:Histone-fold Superfamily:Histone-fold Family:TBP-associated factors, TAFs 45 d2zjrl1 not modelled 6.6 30 Fold:Ribonuclease H-like motif Superfamily:Translational machinery components Family:Ribosomal protein L18 and S11 46 d1cvja1 not modelled 6.5 11 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 47 d2otaa1 not modelled 6.5 33 Fold:YejL-like Superfamily:YejL-like Family:YejL-like 48 c3swyB_ not modelled 6.3 12 PDB header:transport protein Chain: B: PDB Molecule:cyclic nucleotide-gated cation channel alpha-3; PDBTitle: cnga3 626-672 containing clz domain 49 d1ovya_ not modelled 6.2 40 Fold:Ribonuclease H-like motif Superfamily:Translational machinery components Family:Ribosomal protein L18 and S11 50 c2kxyA_ not modelled 6.1 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of sur18c from streptococcus thermophilus.2 northeast structural genomics consortium target sur18c 51 d2cqba1 not modelled 6.0 22 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 52 c1qzuB_ not modelled 5.9 25 PDB header:lyase Chain: B: PDB Molecule:hypothetical protein mds018; PDBTitle: crystal structure of human phosphopantothenoylcysteine decarboxylase 53 d1igqa_ not modelled 5.9 17 Fold:SH3-like barrel Superfamily:C-terminal domain of transcriptional repressors Family:Transcriptional repressor protein KorB 54 d1ov2a_ not modelled 5.9 13 Fold:RAP domain-like Superfamily:RAP domain-like Family:RAP domain 55 c1xe1A_ not modelled 5.8 31 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein pf0907; PDBTitle: hypothetical protein from pyrococcus furiosus pfu-880080-001 56 d1xe1a_ not modelled 5.8 31 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Translation proteins Family:Elongation factors 57 d1bv8a_ not modelled 5.8 11 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:Alpha-macroglobulin receptor domain Family:Alpha-macroglobulin receptor domain 58 d2j0sd1 not modelled 5.6 15 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 59 c1m7lA_ not modelled 5.5 11 PDB header:sugar binding protein Chain: A: PDB Molecule:pulmonary surfactant-associated protein d; PDBTitle: solution structure of the coiled-coil trimerization domain2 from lung surfactant protein d 60 d1kyza2 not modelled 5.4 13 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Plant O-methyltransferase, C-terminal domain 61 d1jeyb1 not modelled 5.3 8 Fold:SPOC domain-like Superfamily:SPOC domain-like Family:Ku80 subunit middle domain 62 d1huwa_ not modelled 5.2 12 Fold:4-helical cytokines Superfamily:4-helical cytokines Family:Long-chain cytokines 63 c3cxjB_ not modelled 5.2 16 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an uncharacterized protein from2 methanothermobacter thermautotrophicus 64 c3nmdA_ not modelled 5.2 17 PDB header:transferase Chain: A: PDB Molecule:cgmp dependent protein kinase; PDBTitle: crystal structure of the leucine zipper domain of cgmp dependent2 protein kinase i beta 65 d1jeya1 not modelled 5.2 17 Fold:SPOC domain-like Superfamily:SPOC domain-like Family:Ku70 subunit middle domain