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Job DescriptionP13001
Confidence99.93%DateThu Jan 5 11:33:21 GMT 2012
Rank83Aligned Residues255
% Identity17%Templated1hlga_
SCOP infoalpha/beta-Hydrolases alpha/beta-Hydrolases Gastric lipase
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10... ......20......... 30...... ...40.........50......
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Query Sequence  MNNIWWQTKGQGN. VHLVLLHGWGLNAEVW. . . . . . RCIDEEL. SSHFTLHLVDLPGFGRSRGF. . . . . . . . . . . . . . . .
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Template Sequence  VNRIPYGKKNSGQRPVVFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFD
Template Known Secondary structure 
S
SSTT





TT

GGGGGSS
TTS
TT



TTSTT


BSSS
TTSTGGG


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   42.......50.........60.........70.........80.........90.........100.........110.........120.
 
   57..60.........70.........80.........90....... ..100.........110.........120.........130
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Query Sequence  . . . GALSLADMAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPE. . . RVQALVTVASSPCFSARDEWPGIKPDVLAGFQQ
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Template Sequence  EMAKYDLPATIDFIVKKTGQKQLHYVGHSQGTTIGFIAFSTNPSLAKRIKTFYALAPVATVKYTKSLINKLRFVPQSLFK
Template Known Secondary structure  T

S
T
TTS

S

SS

SGGGGGGG

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   125....130.........140.........150.........160.........170.........180.........190.........200....
 
   131... .....140.........150.........160.......
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Query Sequence  QLSD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DFQRTVERFLALQTMGTETARQDARALKKTVLA
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Template Conservation                                                                                  
Template Sequence  FIFGDKIFYPHNFFDQFLATEVCSREMLNLLCSNALFIICGFDSKNFNTSRLDVYLSHNPAGTSVQNMFHWTQAVKSGKF
Template Known Secondary structure 
SSB


TTTTTTSS
T




TTS
GGGTT

S

B
S
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   205....210.........220.........230.........240.........250.........260.........270.........280....
 
   168.170.........180.........190.........200.........210.........220.... .....230......... 240...
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Query Sequence  LPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPH. SESYIFAKAAHAPFI. . . SHPA
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Template Sequence  QAYDWGSPVQNRMHYDQSQPPYYNVTAMNVPIAVWNGGKDLLADPQDVGLLLPKLPNLIYHKEIPFYNHLDFIWAMDAPQ
Template Known Secondary structure  B



SSSSSS

B

GGG

S
TT
SSS

TTTT

TT
TT
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   285....290.........300.........310.........320.........330.........340.........350.........360....
 
   244.....250.....
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Query Sequence  EFCHLLVALKQR
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Template Conservation   
   
  

  
Template Sequence  EVYNDIVSMISE
Template Known Secondary structure  TTT
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   365....370......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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