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Job DescriptionP13001
Confidence99.94%DateThu Jan 5 11:33:21 GMT 2012
Rank75Aligned Residues249
% Identity14%Templatec3qitB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:polyketide synthase; PDBTitle: thioesterase domain from curacin biosynthetic pathway
Resolution1.68 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10... ......20.........30...... ...40.........50........ .60.........70..
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Query Sequence  NNIWWQTKGQGN. VHLVLLHGWGLNAEVWRCIDEEL. SSHFTLHLVDLPGFGRSRGFGA. . . . . . . LSLADMAEAVLQQA
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Template Sequence  NQICLCSWGSPEHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFLAQIDRVIQELP
Template Known Secondary structure  S
TTS


TT

GGGGTT


TTSTTS


SSGGG
SS
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   11........20.........30.........40.........50.........60.........70.........80.........90
 
   73......80.........90.........100.........110.........120.........130.........140.........150..
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Query Sequence  PDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTE
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Template Sequence  DQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSSTPQHPIFPDVATAASRLRQA
Template Known Secondary structure  SS
T
GGGS








S

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BSS
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   91........100.........110.........120.........130.........140.........150.........160.........170
 
   153......160.........170 .........180.........190.........200.........210.........220
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Query Sequence  TARQDARALKKTVLALPM. . . . . . . . . . . . PEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDK
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Template Sequence  IPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTILGLNNLPGGRSQYLEMLKSIQVPTTLVYGDSSKLNRPEDLQQQKM
Template Known Secondary structure  STTS
TTT
S
GGG




TTS
TT


S
TT

SS
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   171........180.........190.........200.........210.........220.........230.........240.........250
 
   221........230.........240.........250.
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Query Sequence  LWPHSESYIFAKAAHAPFISHPAEFCHLLVA
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Template Sequence  TMTQAKRVFLSG. GHNLHIDAAAALASLILT
Template Known Secondary structure 
TT
SS.SS
TT
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   253......260.... .....270.........280..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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