Job Description P13001 Confidence 99.95% Date Thu Jan 5 11:33:21 GMT 2012 Rank 66 Aligned Residues 253 % Identity 18% Template c3nwoA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:proline iminopeptidase; PDBTitle: crystal structure of proline iminopeptidase mycobacterium smegmatis Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.						.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.										.	.	.	.
Predicted Secondary structure												.	.	.	.	.																												.	.																								.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.																												.	.																								.	.	.	.	.	.	.	.	.
Query Sequence		N	N	I	W	W	Q	T	K	G	Q	.	.	.	.	.	G	N	V	H	L	V	L	L	H	G	W	G	L	N	A	E	V	W	R	C	I	D	E	E	L	S	S	.	.	H	F	T	L	H	L	V	D	L	P	G	F	G	R	S	R	G	F	G	A	L	S	L	.	.	.	.	.	.	.	.	.	A	D	M	A
Query Conservation												.	.	.	.	.																												.	.																								.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.																												.	.																								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	E	T	W	V	Q	V	T	T	P	E	N	A	Q	P	H	A	L	P	L	I	V	L	H	G	G	P	G	M	A	H	N	Y	V	A	N	I	A	A	L	A	D	E	T	G	R	T	V	I	H	Y	D	Q	V	G	C	G	N	S	T	H	L	P	D	A	P	A	D	F	W	T	P	Q	L	F	V	D	E	F	H
Template Known Secondary structure												S	S			T	T										T	T	T			S	G	G	G	G	G	G	G	G						T									T	T	S	T	T	S				T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	V	L	Q	Q	A	P	D	K	A	I	W	L	G	W	S	L	G	G	L	V	A	S	Q	I	A	L	T	H	P	E	R	V	Q	A	L	V	T	V	A	S	S	P	C	F	S	A	R	D	E	W	P	G	I	K	P	D	V	L	A	G	F	Q	Q	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	C	T	A	L	G	I	E	R	Y	H	V	L	G	Q	S	W	G	G	M	L	G	A	E	I	A	V	R	Q	P	S	G	L	V	S	L	A	I	C	N	S	P	A	S	M	R	L	W	S	E	A	A	G	D	L	R	A	Q	L	P	A	E	T	R	A	A	L	D	R	H	E	A	A	G	T	I	T	H	P
Template Known Secondary structure								T			S							T												T			T	T								S			S	B															S															T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
				133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	S	D	D	F	Q	R	T	V	E	R	F	L	A	L	Q	T	M	G	T	E	T	A	R	Q	D	A	R	A	L	K	K	T	V	L	A	L	P	M	P	E	V	D	V	L	N	G	G	L	E	I	L	K	T	V	D	L	R	Q	P	L	Q	N	V	S	M	P	F	L	R	L	Y	G	Y	L	D	G	L	V
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		D	Y	L	Q	A	A	A	E	F	Y	R	R	H	V	C	R	V	V	P	T	P	Q	D	F	A	D	S	V	A	Q	M	E	A	E	P	T	V	Y	H	T	M	N	G	P	N	E	F	H	V	V	G	T	L	G	D	W	S	V	I	D	R	L	P	D	V	T	A	P	V	L	V	I	A	G	E	H	D	E	A	T
Template Known Secondary structure															T			S	S	S															S								T		S		S	S	S			S	G	G	G	G		B		G	G	G	G	G	G			S								T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	K	V	V	P	M	L	D	K	L	W	P	H	S	E	S	Y	I	F	A	K	A	A	H	A	P	F	I	S	H	P	A	E	F	C	H	L	L	V	A	L	K	Q	R
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		P	.	K	T	W	Q	P	F	V	D	H	I	P	D	V	R	S	H	V	F	P	G	T	S	H	C	T	H	L	E	K	P	E	E	F	R	A	V	V	A	Q	F	L	H	Q
Template Known Secondary structure			.											S	S							T	T			T	T					S
Template Predicted Secondary structure			.
Template SS confidence
		257		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions