Job Description P13001 Confidence 99.77% Date Thu Jan 5 11:33:21 GMT 2012 Rank 108 Aligned Residues 218 % Identity 11% Template c3mveB_ PDB info PDB header:lyase Chain: B: PDB Molecule:upf0255 protein vv1_0328; PDBTitle: crystal structure of a novel pyruvate decarboxylase Resolution 2.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70									.	.	.
Predicted Secondary structure																									.													.																																	.	.	.	.	.	.	.	.
Query SS confidence																									.													.																																	.	.	.	.	.	.	.	.
Query Sequence		I	W	W	Q	T	K	G	Q	G	N	V	H	L	V	L	L	H	G	W	G	L	N	A	.	E	V	W	R	C	I	D	E	E	L	S	S	.	H	F	T	L	H	L	V	D	L	P	G	F	G	R	S	R	G	F	G	A	L	S	L	A	D	M	A	E	A	V	L	Q	.	.	.	.	.	.	.	.	Q	A	P
Query Conservation																									.													.																																	.	.	.	.	.	.	.	.
Alig confidence																									.													.																																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	H	L	T	N	T	D	K	P	H	P	V	V	I	V	S	A	G	L	D	S	L	Q	T	D	M	W	R	L	F	R	D	H	L	A	K	H	D	I	A	M	L	T	V	D	M	P	S	V	G	Y	S	S	K	Y	P	L	T	E	D	Y	S	R	L	H	Q	A	V	L	N	E	L	F	S	I	P	Y	V	D	H
Template Known Secondary structure					S		S	S	S											T	T	S		G	G	G							T	T	G	G	G	G	T									T	T	S	G	G	G	T	T	S				S		T	T										G	G	G		T	T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	A	I	W	L	G	W	S	L	G	G	L	V	A	S	Q	I	A	L	T	H	P	E	R	V	Q	A	L	V	T	V	A	S	S	P	C	F	S	A	R	D	E	W	P	G	I	K	P	D	V	L	A	G	F	Q	Q	Q	L	S	D	D	F	Q	R	T	V	E	R	F	L	A	L	Q	T	M	G	T	E	T
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	R	V	G	L	I	G	F	R	F	G	G	N	A	M	V	R	L	S	F	L	E	Q	E	K	I	K	A	C	V	I	L	G	A	P	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	D	I	F	A	S	P	Q	K	L	Q	Q	M
Template Known Secondary structure										T													T	G	G	G								S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S										T	T	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.																																300	.	.	.	.	.	.	.	.	.	310	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	Q	D	A	R	A	L	K	K	T	V	L	A	L	P	M	P	E	V	D	V	L	N	G	G	L	E	I	L	K	T	V	D	L	R	Q	P	L	Q	N	V	S	M	P	F	L	R	L	Y	G	Y	L	D	G	L	V	P	R	K	V	V	P	M	L	D	K	L	W	P	H	S	E	S	Y	I	F	A	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	K	M	Y	L	D	V	L	A	S	R	L	G	K	S	V	V	D	I	Y	S	L	S	G	Q	M	A	A	W	S	L	K	V	Q	G	F	L	S	S	R	K	T	K	V	P	I	L	A	M	S	L	E	G	D	P	V	S	P	Y	S	D	N	Q	M	V	A	F	F	S	T	Y	G	K	A	K	K	I	S	S	K
Template Known Secondary structure													T	T		S											G	G	G	G		T	T	T	T	T	T	T	T	S	S		B	S	S								T	T		S	S	S											T	B	T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	A	P	F	I	S	H	P	A	E	F	C	H	L	L	V	A	L	K	Q	R
Query Conservation
Alig confidence					.	.	.
Template Conservation					.	.	.
Template Sequence		T	I	T	.	.	.	Q	G	Y	E	Q	S	L	D	L	A	I	K	W	L	E	D
Template Known Secondary structure			S	T	.	.	.	T	S
Template Predicted Secondary structure					.	.	.
Template SS confidence
		393	.	.				.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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