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Job DescriptionP13001
Confidence99.94%DateThu Jan 5 11:33:21 GMT 2012
Rank77Aligned Residues248
% Identity16%Templatec3c5wP_
PDB info PDB header:hydrolaseChain: P: PDB Molecule:pp2a-specific methylesterase pme-1; PDBTitle: complex between pp2a-specific methylesterase pme-1 and pp2a core2 enzyme
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30........ .40.........50.........60.........70.
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Query Sequence  NIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSS. . HFTLHLVDLPGFGRSRGFGALSLADMAEAVLQQ. . . . . . . . .
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Template Sequence  TFRVYKSGSEGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVGNVVEAMYGD
Template Known Secondary structure 


SSS


TT

GGGGTT


TTSTT
B
S

S


TSS
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   66...70.........80.........90.........100.........110.........120.........130.........140.....
 
   72.......80.........90.... .....100.........110.........120.........130.........140.........150
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Query Sequence  APDKAIWLGWSLGGLVASQIALT. HPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMG
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Template Sequence  LPPPIMLIGHAMGGAIAVHTASSNLVPSLLGLCMIDV. . VEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKSGQIRN
Template Known Secondary structure  S


TT

TTS
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TTS
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   146...150.........160.........170.........180.. .......190.........200.........210.........220...
 
   151........160.........170.........180.........190.........200.........210.........220.........230
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Query Sequence  TETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIF
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Template Sequence  LESARVSMVGQVKQCKPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDRLDKD. . . LTIGQMQGKFQMQVL
Template Known Secondary structure  GGGT


SS
GGGGGGGTT

S
S
GGG

...TT
S
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   224.....230.........240.........250.........260.........270.........280..... ....290.........300
 
   231........240.........250.....
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Query Sequence  AKAAHAPFISHPAEFCHLLVALKQR
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Template Sequence  PQCGHAVHEDAPDKVAEAVATFLIR
Template Known Secondary structure  TT

S

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   345....350.........360.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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