Job Description P13001 Confidence 74.56% Date Thu Jan 5 11:33:21 GMT 2012 Rank 267 Aligned Residues 144 % Identity 17% Template c3biwD_ PDB info PDB header:cell adhesion/cell adhesion Chain: D: PDB Molecule:neuroligin-1; PDBTitle: crystal structure of the neuroligin-1/neurexin-1beta synaptic adhesion2 complex Resolution 3.50 Å

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		3	.	.	.	.	.	.				10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.								.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.															.	.	.																										.	.	.	.	.	.	.
Query SS confidence									.	.	.															.	.	.																										.	.	.	.	.	.	.
Query Sequence		N	I	W	W	Q	T	K	.	.	.	G	Q	G	N	V	H	L	V	L	L	H	G	W	G	.	.	.	L	N	A	E	V	W	R	C	I	D	E	E	L	S	S	H	F	T	L	H	L	V	D	L	P	.	.	.	.	.	.	.	G	F	G	R	S	R	G	F	G	A	L	S	L	A	D	M	A	E	A	V	L
Query Conservation									.	.	.															.	.	.																										.	.	.	.	.	.	.
Alig confidence									.	.	.															.	.	.																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	I	Y	V	P	T	I	R	D	S	G	G	P	K	P	V	M	V	Y	I	H	G	G	S	Y	M	E	G	T	G	N	L	Y	D	G	S	V	L	A	S	Y	G	N	V	I	V	I	T	V	N	Y	R	L	G	V	L	G	F	L	S	T	G	D	Q	A	A	K	G	N	Y	G	L	L	D	L	I	Q	A	L	R
Template Known Secondary structure										S			S											S	S	S	S	S			T	T	T	S										T																	B		S	S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		70	.										.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.																											.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.																											.	.	.
Query Sequence		Q	Q	.	.	.	.	.	.	.	.	.	A	P	D	K	A	I	W	L	G	W	S	L	G	G	L	V	A	S	Q	I	A	L	T	H	P	E	.	.	.	R	V	Q	A	L	V	T	V	A	S	S	P	C	F	S	A	R	D	E	W	P	G	I	K	P	D	V	L	A	G	F	Q	Q	Q	L	S	D	D	F	Q
Query Conservation				.	.	.	.	.	.	.	.	.																											.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation
Template Sequence		W	T	S	E	N	I	G	F	F	G	G	D	P	L	R	I	T	V	F	G	S	G	A	G	G	S	C	V	N	L	L	T	L	S	H	Y	S	E	K	G	L	F	Q	R	A	I	A	Q	S	G	T	A	L	S	S	W	A	V	S	F	Q	P	A	K	Y	A	R	I	L	A	T	K	V	G	C	N	V	S	D	T
Template Known Secondary structure							G	G	G	G	T												T										T	T	S	T	T	S		T	T	S								T			S	S	S	T	T	S	S		S													T	S				S	S
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	V	E	R	F	L	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	L	V	E	C	L	Q	K
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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