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Job DescriptionP13001
Confidence99.97%DateThu Jan 5 11:33:21 GMT 2012
Rank50Aligned Residues253
% Identity14%Templatec2xt0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:haloalkane dehalogenase; PDBTitle: dehalogenase dppa from plesiocystis pacifica sir-i
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NNIWWQTKGQGN. . VHLVLLHGWGLNAEVWRCIDEELS. SHFTLHLVDLPGFGRSRGFGALS. . . . . . . LADMAEAVLQQ
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Template Sequence  LRMHYVDEGPRDAEHTFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDAVYTFGFHRRSLLAFLDAL
Template Known Secondary structure 

S
TT
S


TT

GGGGTTTTT


TTSTTS
S
GGG

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   33......40.........50.........60.........70.........80.........90.........100.........110..
 
   72.......80.........90.........100.........110........ .120.........130.........140.........150
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Query Sequence  APDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWP. GIKPDVLAGFQQQLSDDFQRTVERFLALQTMG
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Template Sequence  QLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPDLDVGKLMQRAIPGITDAEVA
Template Known Secondary structure  T

S
TT
TTSS



SSS
S
T
TT

STT

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   113......120.........130.........140.........150.........160.........170.........180.........190..
 
   151........160.........170.........180.........190.........200.........210.........220..... ....
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Query Sequence  TETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHS. ESYI
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Template Sequence  AYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLGPEVMGMLRQAIRGCPEPMI
Template Known Secondary structure  TT
SSGGG
GGGGS

STTSTTT

S
TT
SSSSSTT



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   193......200.........210.........220.........230.........240.........250.........260.........270..
 
   230.........240.........250....
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Query Sequence  FAKAAHAPFISHPAEFCHLLVALKQ
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Template Sequence  VEAGGHFVQEHGEPIARAALAAFGQ
Template Known Secondary structure  TT

SSGGGG
TT
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   273......280.........290.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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