Job Description P13001 Confidence 98.70% Date Thu Jan 5 11:33:21 GMT 2012 Rank 203 Aligned Residues 205 % Identity 11% Template c2xe4A_ PDB info PDB header:hydrolase/inhibitor Chain: A: PDB Molecule:oligopeptidase b; PDBTitle: structure of oligopeptidase b from leishmania major Resolution 1.65 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.											.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																						.	.	.																								.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query SS confidence																						.	.	.																								.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query Sequence		G	Q	G	N	V	H	L	V	L	L	H	G	W	G	L	N	A	E	V	W	.	.	.	R	C	I	D	E	E	L	S	S	H	F	T	L	H	L	V	D	L	P	G	F	G	R	.	.	.	.	.	.	.	.	.	.	S	R	G	F	G	A	L	S	L	A	D	M	A	E	A	V	L	Q	Q	.	.	.	.	.
Query Conservation																						.	.	.																								.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Alig confidence																						.	.	.																								.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation
Template Sequence		S	Q	P	Q	P	C	M	L	Y	G	Y	G	S	Y	G	L	S	M	D	P	Q	F	S	I	Q	H	L	P	Y	C	D	R	G	M	I	F	A	I	A	H	I	R	G	G	S	E	L	G	R	A	W	Y	E	I	G	A	K	Y	L	T	K	R	N	T	F	S	D	F	I	A	A	A	E	F	L	V	N	A	K	L
Template Known Secondary structure		T	S												T	T									G	G	G					T	T	T									T	T	S		T	T		T					T	T	S	S	G	G	G	T																	T	T	S
Template Predicted Secondary structure
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
			72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	P	D	K	A	I	W	L	G	W	S	L	G	G	L	V	A	S	Q	I	A	L	T	H	P	E	R	V	Q	A	L	V	T	V	A	S	S	P	C	F	S	A	R	D	E	W	P	G	I	K	P	D	V	L	A	G	F	Q	Q	Q	L	S	D	D	F	Q	R	T	V	E	R	F	L	A	L	Q	T	M	G
Query Conservation		.
Alig confidence		.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Sequence		T	T	P	S	Q	L	A	C	E	G	R	S	A	G	G	L	L	M	G	A	V	L	N	M	R	P	D	L	F	K	V	A	L	A	G	V	P	F	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	M	T	T	M	C	D	P	S	I	P	L	T	T	G	E	W	.	.	E	E	W	G
Template Known Secondary structure				G	G	G							T														G	G	G		S						S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T		T	T	S	T	T					T	.	.	T	T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.																		.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.			.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.					.	.	.
Predicted Secondary structure																																																		.																									.	.	.	.
Query SS confidence																																																		.																									.	.	.	.
Query Sequence		T	E	T	A	R	Q	D	A	R	A	L	K	K	T	V	L	A	L	P	M	P	E	V	D	V	L	N	G	G	L	E	I	L	K	T	V	D	L	R	Q	P	L	Q	N	V	S	M	P	.	F	L	R	L	Y	G	Y	L	D	G	L	V	P	R	K	V	V	P	M	L	D	K	L	W	.	.	.	.	P	H	S
Query Conservation																																																		.																									.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																									.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	N	E	Y	K	Y	Y	D	Y	M	L	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	M	D	N	V	R	A	Q	E	Y	P	N	I	M	V	Q	C	G	L	H	D	P	R	V	A	Y	W	E	P	A	K	W	V	S	K	L	R	E	C	K	T	D	N
Template Known Secondary structure			T	T	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	G	G	G			S	S											T	T		S	S	S		T																S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		627	.	.	630	.	.	.	.	.	.	.	.	.	640																							.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.
		226	.	.	.	230				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.
Predicted Secondary structure							.	.	.																			.	.
Query SS confidence							.	.	.																			.	.
Query Sequence		E	S	Y	I	F	.	.	.	A	K	A	A	H	A	P	F	I	S	H	P	A	E	F	C	H	L	.	.	L	V	A	L	K	Q	R
Query Conservation							.	.	.																			.	.
Alig confidence							.	.	.																			.	.
Template Conservation
Template Sequence		N	E	I	L	L	N	I	D	M	E	S	G	H	F	S	A	K	D	R	Y	K	F	W	K	E	S	A	I	Q	Q	A	F	V	C	K
Template Known Secondary structure										T	T			S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		685	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions