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Job DescriptionP13001
Confidence99.78%DateThu Jan 5 11:33:21 GMT 2012
Rank106Aligned Residues245
% Identity12%Templatec2qruA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an alpha/beta hydrolase superfamily protein from2 enterococcus faecalis
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20. ........30........ .40.........50.........60.........70. ...
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Query Sequence  NIWWQTKGQGNVHLVLLHG. . . . WGLNAEVWRCIDEELSS. HFTLHLVDLPGFGRSRGFGALSLADMAEAVLQQ. . . APD
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Template Sequence  VTIYPTTTEPTNYVVYLHGGGXIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNTKIDHILRTLTETFQLLNEEIIQNQ
Template Known Secondary structure 

SSSS


STTTS

GGG

TTT



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TTTT
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   15....20.........30.........40.........50.........60.........70.........80.........90....
 
   75....80.........90.........100.........110.........120.........130.........140.........150....
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Query Sequence  KAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETA
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Template Sequence  SFGLCGRSAGGYLXLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPR. . . . . . . . KLLKQAISAKEIAAIDQTKPVWDDP
Template Known Secondary structure 
TTT


S
S

S
SGGGGS

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S
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SGGGTTS

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S

T
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   95....100.........110.........120.........130.........140. ........150.........160......
 
   155....160.........170.........180.........190.........200.........210.........220.........230....
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Query Sequence  RQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAA
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Template Sequence  FLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTFPPCFSTASSSDEEVPFRYSKKIGRTIPESTFKAVYYLE
Template Known Secondary structure  T
TTTT
T

TTS

GGG


TS

TT
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S

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   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   235 ....240.........250.....
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Query Sequence  H. . . . APFISHPAEFCHLLVALKQR
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Template Sequence  HDFLKQTKDPSVITLFEQLDSWLKE
Template Known Secondary structure  S
GGGGTTST
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   247..250.........260.........270.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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