Return to main results Retrieve Phyre Job Id

Job DescriptionP13001
Confidence100.00%DateThu Jan 5 11:33:21 GMT 2012
Rank3Aligned Residues253
% Identity22%Templatec1u2eA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:2-hydroxy-6-ketonona-2,4-dienedioic acid PDBTitle: crystal structure of the c-c bond hydrolase mhpc
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30...... ...40.........50.........60.........70. .
Predicted Secondary structure 










....
















......
Query SS confidence 

































. . . .


































. . . . . .
Query Sequence  NIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEEL. . . . SSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQQ. . . . . . A
Query Conservation   
 
   
 
 
 





              
....     

  
  
 
 
                  ...... 
Alig confidence 

































....


































......
Template Conservation   
 
   
 
   





              
  
   
  

  
  
 
 
                         
Template Sequence  RIHFNDCGQGDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSRSDLNARILKSVVDQLD
Template Known Secondary structure 


SS


STT

TTTTTT


TTSTTS




SS
TT
Template Predicted Secondary structure 
































Template SS confidence 















































































   21........30.........40.........50.........60.........70.........80.........90.........100
 
   73......80.........90.........100.........110.........120.........130.........140.........150..
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  PDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTE
Query Conservation                                                                                  
Alig confidence 















































































Template Conservation                                
                                                 
Template Sequence  IAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDL
Template Known Secondary structure 


T
GGGS
S




SSS
SS
S

TTSS
TTS
Template Predicted Secondary structure 





































Template SS confidence 















































































   101........110.........120.........130.........140.........150.........160.........170.........180
 
   153......160.........170.........180.........190.........200.........210.........220.........230..
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  TARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAK
Query Conservation                                               
 
 
 
  
                      
  
Alig confidence 















































































Template Conservation                                               
 
 
 
  
                      
  
Template Sequence  TDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAGSELHIFRD
Template Known Secondary structure 
T
S

S


GGGGGG

S
TT
SSS
TSTT
SS
Template Predicted Secondary structure 


























Template SS confidence 















































































   181........190.........200.........210.........220.........230.........240.........250.........260
 
   233......240.........250.....
Predicted Secondary structure 





Query SS confidence 






















Query Sequence  AAHAPFISHPAEFCHLLVALKQR
Query Conservation   

    
 
      
  

  
Alig confidence 






















Template Conservation   

    
 
      
  

 
Template Sequence  CGHWAQWEHADAFNQLVLNFLAR
Template Known Secondary structure 

S
TT
Template Predicted Secondary structure 






Template SS confidence 






















   261........270.........280...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions