|   |
3 | . | . | . | . | . | . | 10 | . | . | . | |
|
. | . | . | . | . | . | 20 | . | . | . | |
|
|
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
. | 40 | . | . | . | . | . | . | . | . | |
|
|
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|
|
|
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
| . | . |
|  |  |  |  |  |
|
|
|
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
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|
|
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|
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|
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|
|
| . |
. |
|
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|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
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|
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|
Query Sequence |   |
N | I | W | W | Q | T | K | G | Q | G | N | . |
. |
V | H | L | V | L | L | H | G | W | G | . |
. |
. |
L | N | A | E | V | W | R | C | I | D | E | E | L | S | S | . |
. |
H | F | T | L | H | L | V | D | L | P | . |
. |
. |
. |
. |
. |
. |
. |
G | F | G | R | S | R | G | F | G | A | L | S | L | A | D | M | A | E | A |
Query Conservation |   |
  |
|   |
|   |   |   |
|   |
|   | . | . |
|   |
|
|
|
|
|
|   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   | . | . |   |   |   |
|
|   |   |
|   |   | . | . | . | . | . | . | . | . |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
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|
| . | . |
|
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|
| . | . | . | . | . | . | . | . |
|
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|
Template Conservation |   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|
|   |
|   |
|
|
|
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |
|
|   |
|
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|
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|
|   |   |
|
Template Sequence |   |
N | V | W | T | P | Y | P | R | P | T | S | P | T | P | V | L | V | W | I | Y | G | G | G | F | Y | S | G | A | S | S | L | D | V | Y | D | G | R | F | L | V | Q | A | E | R | T | V | L | V | S | M | N | Y | R | V | G | A | F | G | F | L | A | L | P | G | S | R | E | A | P | G | N | V | G | L | L | D | Q | R | L | A |
Template Known Secondary structure |   |
 |  |  |  |  | S | S |
|
| S | S |
|  |  |  |  |  |  |  |
|
| S | T | T | T |
|
|
| T | T |
| G | G | G |
| T |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
| T | T |
| S | S | S |
| S |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
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  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
  |
  |   |
68 | . | 70 | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
|
. | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
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|
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|
| . |
. |
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|
Query Sequence |   |
V | L | Q | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
A | P | D | K | A | I | W | L | G | W | S | L | G | G | L | V | A | S | Q | I | A | L | T | H | P | . |
. |
E | R | V | Q | A | L | V | T | V | A | S | S | P | C | F | S | A | R | D | E | W | P | G | I | K | P | D | V | L | A | G | F | Q | Q | Q | L | S | D | D | F |
Query Conservation |   |
  |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |
|
|   |   |
|
|
|
|
|   |   |
|
|
|   |
|   |
|
|
|
|   |   |
|   |   |
|   |   |
|   |   |   |   |   |
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |   |
Template Sequence |   |
L | Q | W | V | Q | E | N | V | A | A | F | G | G | D | P | T | S | V | T | L | F | G | Q | S | A | G | A | A | S | V | G | M | H | L | L | S | P | P | S | R | G | L | F | H | R | A | V | L | Q | S | G | A | P | N | G | P | W | A | T | V | G | M | G | E | A | R | R | R | A | T | Q | L | A | H | L | V | G | C | P | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | G | G | G | G | T |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G | G | G | G |
| S |  |  |  |  |  | S |
|
| T | T | S | T | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . |
  |
  |   |
137 | . | . | 140 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | R | T | V | E | R | F | L | A | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|
|
|   |
Template Sequence |   |
D | T | E | L | V | A | C | L | R | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
266 | . | . | . | 270 | . | . | . | . | . |
  |