|   |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | |
. | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |
| . |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | V | I | V | G | C | G | A | Q | G | L | N | Q | G | L | N | M | R | D | S | G | L | D | I | S | Y | A | L | R | K | E | A | I | A | E | K | R | A | S | W | R | K | A | T | E | N | G | F | K | V | G | . |
T | Y | E | E | L | I | P | Q | A | D | L | V | I | N | L | T | P | D | K | Q | H | S | D | V | V | R | T | V |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |
|   | . |   |   |   |
|
|
|   |   |
|
|
|
|   |   |
|   |
|
|
|   |
|   |   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|   |
|
|   |
|
|
|   |   |
|   |   |   |
| . | . | . |
|   |   | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |   |
|   |   |
|   |   |   |
|
Template Sequence |   |
L | N | F | V | G | T | G | T | L | T | R | F | F | L | E | C | L | K | I | G | Y | . |
. |
. |
I | L | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | S | I | D | R | A | R | N | L | A | E | V | Y | G | G | K | A | A | T | L | E | K | H | P | E | V | V | F | V | I | V | P | D | R | Y | I | K | T | V | A | N | H | L |
Template Known Secondary structure |   |
|  |  |  | S |
|
|  |  |  |  |  |  |  |  | T | T |
|
|
|
| . | . | . |  |  |
| . | . | . | . | . | . | . | . | . | . | S | S |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
|
| S | S |
|
|
|
|
|
|  |  |  |
| S |
| T | T | T |  |  |  |  |  | T | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
|
|
. | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
  |
  |   |
119 | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | P | L | M | K | D | G | A | A | L | G | Y | S | H | G | F | N | I | V | E | V | G | E | Q | I | R | K | D | I | T | V | V | M | V | A | P | K | C | P | G | T | E | V | R | E | E | Y | K | R | G | F | G | V | P | T | L | I | A | V | H | P | E | N | D | P | K | G | E | G | M | A | I | A | K | A | W | A | A | A | T |
Query Conservation |   |
  |
|   |
|
|   |
|   |   |
|   |
|
|
|
|
|
|
|   |
|   |   |
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |
|   |
|
|
|   |
|   |
|
|
|   |   |
|
|   |
|
|   |
|   |   |   |
|
|
|
|
|   |
|
|
Alig confidence |   |
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
| . | . |
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   | . | . | . |   |   |   |
|
|
|   |   |
|   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   | . | . |   |   |
| . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
Template Sequence |   |
N | L | . |
. |
. |
G | D | A | V | L | V | H | C | S | G | . |
. |
F | L | S | S | E | I | F | K | K | S | G | R | A | S | I | H | P | N | F | S | F | L | E | K | A | L | E | . |
. |
. |
. |
X | K | D | Q | I | V | . |
. |
F | G | L | . |
. |
. |
. |
E | G | D | E | R | G | L | P | I | V | K | K | I | A | E | E | I |
Template Known Secondary structure |   |
|
| . | . | . | S | S |
|
|  |  |  |
|
| S | . | . | S | S |
| G | G | G | G |
| S | S | S |  |  |  |  |  |  |
| S |
|
|
| T | T | G | G | G | . | . | . | . |
| G | G | G |
|
| . | . |  |  |  | . | . | . | . |
|
|
| T | T | T |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  | . | . | . |
|
|
|  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  | . | . | . | . |  |  |  |
|
|
| . | . |  |  |  | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
77 | . | |
|
|
. | 80 | . | . | . | . | . | . | . | . | |
|
. | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
|
|
|
. | . | . | . | 120 | . | |
|
. | . | . | |
|
|
|
. | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
  |
  |   |
199 | 200 |
Predicted Secondary structure |   |
|
|
Query SS confidence |   |
|
|
Query Sequence |   |
G | G |
Query Conservation |   |
|   |
Alig confidence |   |
|
|
Template Conservation |   |
|   |
Template Sequence |   |
S | G |
Template Known Secondary structure |   |
| S |
Template Predicted Secondary structure |   |
|
|
Template SS confidence |   |
|
|
  |   |
144 | . |
  |