Return to main results Retrieve Phyre Job Id

Job DescriptionP05793
Confidence97.33%DateThu Jan 5 10:58:54 GMT 2012
Rank130Aligned Residues89
% Identity20%Templated1pjca1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Formate/glycerate dehydrogenases, NAD-domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60.........70.........80......... 90.........100.. ..
Predicted Secondary structure 
























........




..
Query SS confidence 






















































. . . . . . . .












. .

Query Sequence  LQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKV. . . . . . . . GTYEELIPQADLV. . IN
Query Conservation 



 









 










 





  
      
   
  


 
........    


  



..  
Alig confidence 



































......












........












..

Template Conservation      

 


 
 

  

  
   
  
   

  ......                       
 
 
   



  
Template Sequence  VKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV. . . . . . ERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAV
Template Known Secondary structure  B




STT
S
......GGGS

T
S

Template Predicted Secondary structure 











......


















Template SS confidence 















































































   165....170.........180.........190.........200 .........210.........220.........230........
 
   105....110..... ....120.........
Predicted Secondary structure 

.




Query SS confidence 










.













Query Sequence  LTPDKQHSDVV. RTVQPLMKDGAALG
Query Conservation 
 


 
  

.
 
 
 

 
  
 
Alig confidence 










.













Template Conservation        
  

    
  

 




Template Sequence  LVPGRRAPILVPASLVEQMRTGSVIV
Template Known Secondary structure 

TTSS



B
TTS
TT
Template Predicted Secondary structure 















Template SS confidence 

























   239240.........250.........260....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions