Job Description P05793 Confidence 86.58% Date Thu Jan 5 10:58:54 GMT 2012 Rank 329 Aligned Residues 72 % Identity 19% Template c3u62A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from thermotoga maritima Resolution 1.45 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.						.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																					.																								.	.	.	.	.
Query SS confidence																																					.																								.	.	.	.	.
Query Sequence		E	F	A	D	G	A	S	Y	L	Q	G	K	K	V	V	I	V	G	C	G	A	Q	G	L	N	Q	G	L	N	M	R	D	S	G	L	.	D	I	S	Y	A	L	R	K	E	A	I	A	E	K	R	A	S	W	R	K	A	T	E	.	.	.	.	.	N	G	F	K	V	G	T	Y	E	E	L	I	P	Q	A	D
Query Conservation																																					.																								.	.	.	.	.
Alig confidence																																					.						.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.
Template Sequence		V	V	K	S	L	E	G	V	E	V	K	E	P	V	V	V	V	G	A	G	G	A	A	R	A	V	I	Y	A	L	L	Q	M	G	V	K	D	I	W	V	V	.	.	.	.	.	.	.	.	.	N	R	T	I	E	R	A	K	A	L	D	F	P	V	K	I	F	S	L	D	Q	L	D	E	V	V	K	K	A	K
Template Known Secondary structure						T	T	T					S	S							S													T	T								.	.	.	.	.	.	.	.	.		S							T			S	S						G	G	G							T		S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.										.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		101	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	I	N	L	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	F	N	T	T	S
Template Known Secondary structure							S	S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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