Job Description P05793 Confidence 98.05% Date Thu Jan 5 10:58:54 GMT 2012 Rank 67 Aligned Residues 194 % Identity 12% Template c3pefA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase, nad-binding; PDBTitle: crystal structure of gamma-hydroxybutyrate dehydrogenase from2 geobacter metallireducens in complex with nadp+ Resolution 2.07 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	V	V	I	V	G	C	G	A	Q	G	L	N	Q	G	L	N	M	R	D	S	G	L	D	I	S	Y	A	L	R	K	E	A	I	A	E	K	R	A	S	W	R	K	A	T	E	N	G	F	K	V	G	T	Y	E	E	L	I	P	Q	A	D	L	V	I	N	L	T	P	D	K	Q	H	S	D	V	V	R	T
Query Conservation
Alig confidence																																			.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.
Template Sequence		Q	K	F	G	F	I	G	L	G	I	M	G	S	A	M	A	K	N	L	V	K	A	G	C	S	V	T	I	W	N	R	S	P	.	.	.	.	.	.	E	K	A	E	E	L	A	A	L	G	A	E	R	A	A	T	P	E	V	V	E	S	C	P	V	T	F	A	M	L	A	D	P	A	A	A	E	E	V	C	F
Template Known Secondary structure										S													T	T								S	S	G	.	.	.	.	.	.	G	G	G						T	T					S									S							S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.							.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
						118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure		.	.	.	.																									.	.	.
Query SS confidence		.	.	.	.																									.	.	.
Query Sequence		.	.	.	.	V	Q	P	L	M	K	D	G	A	A	L	G	Y	S	H	G	F	N	I	V	E	V	G	E	.	.	.	Q	I	R	K	D	I	T	V	V	M	V	A	P	K	C	P	G	T	E	V	R	E	E	Y	K	R	G	F	G	V	P	T	L	I	A	V	H	P	E	N	D	P	K	G	E	G	M	A	I
Query Conservation		.	.	.	.																									.	.	.
Alig confidence		.	.	.	.																									.	.	.																								.	.	.	.	.										.	.	.	.	.
Template Conservation																																																								.	.	.	.	.										.	.	.	.	.
Template Sequence		G	K	H	G	V	L	E	G	I	G	E	G	R	G	Y	V	D	M	S	T	V	D	P	A	T	S	Q	R	I	G	V	A	V	V	A	K	G	G	R	F	L	E	A	P	V	S	G	S	K	K	P	A	E	D	.	.	.	.	.	G	T	L	I	I	L	A	A	G	.	.	.	.	.	D	R	N	L	Y	D	E
Template Known Secondary structure		S	T	T								T	T							S																	T	T																		.	.	.	.	.	T									.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.										.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130						.	.	.	.	.	.	.	.	.						140	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	A	W	A	A	A	T	G	G	H	R	A	G	V	L	E	S	S	F	V	A	E	V	K	S	D	L	M	G	E	Q	T	I	L	C	G	M	L	Q	A	G	S	L	L	C	F	D	K	L	V	E	E	G	T	D	P	A	Y	A	E
Query Conservation
Alig confidence												.	.																			.	.
Template Conservation												.	.																			.	.
Template Sequence		A	M	P	G	F	E	K	M	G	K	.	.	K	I	I	H	L	G	D	V	G	K	G	A	E	M	K	L	V	V	.	.	N	M	V	M	G	G	M	M	A	C	F	C	E	G	L	A	L	G	E	K	A	G	L	A	T	D	A	I	L
Template Known Secondary structure												.	.						S	S	T	T										.	.																					T	T
Template Predicted Secondary structure												.	.																			.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions