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Job Description | P05793 | Confidence | 60.20% | Date | Thu Jan 5 10:58:54 GMT 2012 |
Rank | 498 | Aligned Residues | 88 |
% Identity | 11% | Template | c3nepX_ |
PDB info |
PDB header:oxidoreductase | Chain: X: PDB Molecule:malate dehydrogenase; |
PDBTitle: 1.55a resolution structure of malate dehydrogenase from salinibacter2 ruber
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Resolution | 1.55 Å |
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39 | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | |
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. | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query Sequence |   |
K | V | V | I | V | G | C | G | A | Q | G | L | N | Q | G | L | N | M | R | D | S | G | L | D | I | S | Y | A | L | R | K | E | A | I | A | E | K | R | A | S | W | R | K | A | T | E | N | G | F | K | . |
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V | G | T | Y | E | E | L | I | P | Q | A | D | L | V | I | N | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | V | T | V | I | G | A | G | N | V | G | A | T | V | A | E | C | V | A | R | Q | D | V | A | K | E | V | V | M | V | D | I | K | . |
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D | G | M | P | Q | G | K | A | L | D | M | R | E | S | S | P | I | H | G | F | D | T | R | V | T | G | T | N | D | Y | G | P | T | E | D | S | D | V | C | I | I | T |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
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106 | . | . | . | 110 | . | . | |
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. | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
T | P | D | K | Q | H | S | . |
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D | V | V | R | T | V | Q | P | L | M | K | D | G | A | A | L | G | Y | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | G | L | R | D | D | L | L | A | K | N | T | E | I | V | G | G | V | T | E | Q | F | V | E | G | S | P | D | S | T | I | I | V | V | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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