Job Description P05793 Confidence 98.56% Date Thu Jan 5 10:58:54 GMT 2012 Rank 27 Aligned Residues 216 % Identity 10% Template c3l6dB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of putative oxidoreductase from pseudomonas putida2 kt2440 Resolution 1.90 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		K	V	V	I	V	G	C	G	A	Q	G	L	N	Q	G	L	N	M	R	D	S	G	L	D	I	S	Y	A	L	R	K	E	A	I	A	E	K	R	A	S	W	R	K	A	T	E	N	G	F	K	.	V	G	T	Y	E	E	L	I	P	Q	A	D	L	V	I	N	L	T	P	D	K	Q	H	S	D	V	V	R	T
Query Conservation																																																				.
Alig confidence																																		.	.	.	.	.	.													.
Template Conservation																																		.	.	.	.	.	.
Template Sequence		D	V	S	V	I	G	L	G	A	X	G	T	I	X	A	Q	V	L	L	K	Q	G	K	R	V	A	I	W	N	R	S	P	.	.	.	.	.	.	G	K	A	A	A	L	V	A	A	G	A	H	L	C	E	S	V	K	A	A	L	S	A	S	P	A	T	I	F	V	L	L	D	N	H	A	T	H	E	V	L	G
Template Known Secondary structure		S							S													T	T								S			.	.	.	.	.	.									T	T					S	S								S	S							S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.							.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
				118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure		.	.																								.	.	.	.
Query SS confidence		.	.																								.	.	.	.
Query Sequence		.	.	V	Q	P	L	M	K	D	G	A	A	L	G	Y	S	H	G	F	N	I	V	E	V	G	.	.	.	.	E	Q	I	R	K	D	I	T	V	V	M	V	A	P	K	C	P	G	T	E	V	R	E	E	Y	K	R	G	F	G	V	P	T	L	I	A	V	H	P	E	N	D	P	K	G	E	G	M	A	I	A
Query Conservation		.	.																								.	.	.	.
Alig confidence		.	.																								.	.	.	.																		.	.	.	.	.	.	.	.													.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.													.	.	.
Template Sequence		X	P	G	V	A	R	A	L	A	H	R	T	I	V	D	Y	T	T	N	A	Q	D	E	G	L	A	L	Q	G	L	V	N	Q	A	G	G	H	Y	V	K	G	X	I	V	A	Y	.	.	.	.	.	.	.	.	P	R	N	V	G	H	R	E	S	H	S	I	.	.	.	H	T	G	D	R	E	A	F	E	Q	H
Template Known Secondary structure		S	T	T						T	T							S																	T	T										S		.	.	.	.	.	.	.	.	G	G	G	T	T		T	T					.	.	.											T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.													.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130									.	.	.	.	.	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	W	A	A	A	T	G	G	H	R	A	G	V	L	E	S	S	F	V	A	E	V	K	S	D	L	M	G	E	Q	T	I	L	C	G	M	L	Q	A	G	S	L	L	C	F	D	K	L	V	E	E	G	T	D	P	A	Y	A	E	K	L	I	Q	F	G	W	E	T	I	T	E	A	L	K	Q	G	G	I	T
Query Conservation
Alig confidence											.	.	.							.	.
Template Conservation											.	.	.							.	.
Template Sequence		R	A	L	L	E	G	L	A	G	.	.	.	H	T	V	F	L	P	.	.	W	D	E	A	L	A	F	A	T	V	L	H	A	H	A	F	A	A	X	V	T	F	F	E	A	V	G	A	G	D	R	F	G	L	P	V	S	K	T	A	R	L	L	L	E	T	S	R	F	F	V	A	D	A	L	E	E	A	V	R
Template Known Secondary structure						T	T	T		S	.	.	.							.	.																																T	T
Template Predicted Secondary structure											.	.	.							.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.				.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		272	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	M	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	E	T	Q
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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