Job Description P05793 Confidence 96.41% Date Thu Jan 5 10:58:54 GMT 2012 Rank 166 Aligned Residues 102 % Identity 26% Template c3ketA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:redox-sensing transcriptional repressor rex; PDBTitle: crystal structure of a rex-family transcriptional regulatory protein2 from streptococcus agalactiae bound to a palindromic operator Resolution 2.40 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.																																										.	.	.	.	.
Query SS confidence																							.	.																																										.	.	.	.	.
Query Sequence		Q	G	K	K	V	V	I	V	G	C	G	A	Q	G	L	N	Q	G	L	N	M	.	.	R	D	S	G	L	D	I	S	Y	A	L	R	K	E	A	I	A	E	K	R	A	S	W	R	K	A	T	E	N	G	F	K	V	G	T	Y	E	E	L	I	P	.	.	.	.	.	Q	A	D	L	V	I	N	L	T	P	D
Query Conservation																							.	.																																										.	.	.	.	.
Alig confidence																							.	.																.	.	.	.																							.	.	.	.	.
Template Conservation																																								.	.	.	.
Template Sequence		S	T	T	N	V	M	L	V	G	C	G	N	I	G	R	A	L	L	H	Y	R	F	H	D	R	N	K	M	Q	I	S	M	A	F	D	L	D	S	.	.	.	.	N	D	L	V	G	K	T	T	E	D	G	I	P	V	Y	G	I	S	T	I	N	D	H	L	I	D	S	D	I	E	T	A	I	L	T	V	P	S
Template Known Secondary structure		S										S								T	S		G	G	G	T	S	S										T	T	.	.	.	.	S	T	T	T	T	S	B		T	T	S		B				G	G	G					T	S	S	S									S		G
Template Predicted Secondary structure																																								.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		K	Q	H	S	D	V	V	R	T	.	V	Q	P	L	M	K	D	G	A	A	L	G	Y	S	H	G	F	N	I	V	E	V	G	E	Q	I	R	K	D	I	T	V
Query Conservation											.
Alig confidence											.								.	.							.	.	.	.	.	.
Template Conservation																			.	.							.	.	.	.	.	.
Template Sequence		T	E	A	Q	E	V	A	D	I	L	V	K	A	G	I	K	G	.	.	I	L	S	F	S	P	.	.	.	.	.	.	V	H	L	T	L	P	K	D	I	I	V
Template Known Secondary structure		G	G											T	T				.	.					S	S	.	.	.	.	.	.	S						T	T	S
Template Predicted Secondary structure																			.	.							.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.							.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions