|   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
|
|
|
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | |
. | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |
|
|
| . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |
| . |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | G | K | K | V | V | I | V | G | C | G | A | Q | G | L | N | Q | G | L | N | M | R | D | S | G | L | . |
. |
. |
. |
D | I | S | Y | A | L | R | K | E | A | I | A | E | K | R | A | S | W | R | K | A | T | E | N | G | F | K | V | G | . |
T | Y | E | E | L | I | P | Q | A | D | L | V | I | N | L | T | P | D | K | Q |
Query Conservation |   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |   |
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |
|   | . |   |   |   |
|
|
|   |   |
|
|
|
|   |   |
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|   |
|
|   |
|   |
|
|   |
|   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |
|   |   |
|   |   |   | . | . | . | . | . |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|   |
|   |   |
Template Sequence |   |
X | D | K | Q | I | G | F | I | G | C | G | N | X | G | X | A | X | I | G | G | X | I | N | K | N | I | V | S | S | N | Q | I | I | C | S | D | L | N | T | A | . |
. |
. |
. |
. |
N | L | K | N | A | S | E | K | Y | G | L | T | T | T | T | D | N | N | E | V | A | K | N | A | D | I | L | I | L | S | I | K | P | D | L |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
| G | G | G |  |  |  |  |
| S |
|  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|  |  |
| S |
|  |  |  |  |  |  |  |
| S |  |  |  |  |
| S |
| T | T | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
  |
  |   |
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | S | D | V | V | R | T | V | Q | P | L | M | K | D | G | A | A | L | G | Y | S | H | G | F | N | I | V | E | V | G | E | Q | I | R | K | D | I | T | V | V | M | V | A | P | K | C | P | G | T | E | V | R | E | E | Y | K | R | G | F | G | V | P | T | L | I | A | V | H | P | E | N | D | P | K | G | E | G | M | A | I |
Query Conservation |   |
|   |   |
|
|
|   |
|   |
|   |
|
|   |
|   |   |
|   |
|
|
|
|
|
|
|   |
|   |   |
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |
|   |
|
|
|   |
|   |
|
|
|   |   |
|
|   |
|
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |   |   |   | . | . |   |   |   |   |   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
Y | A | S | I | I | K | E | I | I | K | . |
. |
N | D | A | I | I | V | T | I | A | A | G | K | S | I | E | S | T | E | N | A | F | N | K | K | V | K | V | V | R | V | X | P | N | T | P | A | L | V | . |
. |
. |
. |
. |
. |
. |
G | E | G | X | S | A | L | C | P | N | . |
. |
. |
E | X | V | T | E | K | D | L | E | D |
Template Known Secondary structure |   |
 |  |  |  |
|
|
| S | S |
| . | . | T | T |
|  |  |  |  |
| S |
|
| S |
|  |  |  |  |  |  |  |  |
| S |
|
|  |  |  |  |  |  |
|
| G | G | G | G | G | . | . | . | . | . | . | . | T |
|  |  |  |  |  |  |  |
| . | . | . | T | T |
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |
| . | . | . |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
76 | . | . | . | 80 | . | . | . | . | . | |
|
. | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 130 | . | . | . | |
|
|
. | . | . | . | . | . | 140 | . | . | . |
  |
  |   |
191 | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | |
|
|
|
. | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | K | A | W | A | A | A | T | G | G | H | R | A | G | V | L | E | S | S | F | V | A | E | V | K | S | D | L | M | G | E | Q | T | I | L | C | G | M | . |
. |
. |
. |
L | Q | A | G | S | L | L | C | F | D | K | L | V | E | E | G | T | D | P | A | Y | A | E | K | L | I | Q | F | G | W | E | T | I | T | E | A | L | K |
Query Conservation |   |
|
|
|
|
|   |
|
|
|   |   |
|
|
|
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
| . | . | . | . |
|   |
|
|   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|
|
|   |   |
|   |
|
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |   |
| . | . | . | . | . | . | . |   |   |   |   |
|   |
|   |   |   |   |   |   | . | . | . |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
Template Sequence |   |
V | L | N | I | F | N | S | F | G | . |
. |
. |
. |
. |
. |
. |
Q | T | E | I | V | S | E | K | L | X | D | V | V | . |
. |
. |
T | S | V | S | G | S | S | P | A | Y | V | Y | X | I | I | E | A | X | A | D | A | A | V | L | D | G | X | P | R | N | Q | A | Y | K | F | A | A | Q | A | V | L | G | S | A | K | X | V | L |
Template Known Secondary structure |   |
 |  |  |  |  | G | G | G |  | . | . | . | . | . | . | . |  |  |  |  |
|
| G | G | G |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . |
|  |  |  |  |
|  |  |  |
|
|  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
147 | . | . | 150 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 160 | . | . | . | . | . | . | . | . | |
|
|
. | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . |
  |
  |   |
267 | . | . | 270 |
Predicted Secondary structure |   |
 |  |  |  |
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
Q | G | G | I |
Query Conservation |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
Template Conservation |   |
  |   |
|   |
Template Sequence |   |
E | T | G | I |
Template Known Secondary structure |   |
 | S |
|
|
Template Predicted Secondary structure |   |
 |  |
|
|
Template SS confidence |   |
|
|
|
|
  |   |
217 | . | . | 220 |
  |