Job Description P05793 Confidence 98.27% Date Thu Jan 5 10:58:54 GMT 2012 Rank 46 Aligned Residues 197 % Identity 18% Template c3g0oA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:3-hydroxyisobutyrate dehydrogenase; PDBTitle: crystal structure of 3-hydroxyisobutyrate dehydrogenase2 (ygbj) from salmonella typhimurium Resolution 1.80 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.
Predicted Secondary structure																																																								.																		.
Query SS confidence																																																								.																		.
Query Sequence		G	K	K	V	V	I	V	G	C	G	A	Q	G	L	N	Q	G	L	N	M	R	D	S	G	L	D	I	S	Y	A	L	R	K	E	A	I	A	E	K	R	A	S	W	R	K	A	T	E	N	G	F	K	V	G	.	T	Y	E	E	L	I	P	Q	A	D	L	V	I	N	L	T	P	.	D	K	Q	H	S	D	V
Query Conservation																																																								.																		.
Alig confidence																																					.	.	.	.	.															.																		.
Template Conservation																																					.	.	.	.	.
Template Sequence		D	F	H	V	G	I	V	G	L	G	S	X	G	X	G	A	A	R	S	C	L	R	A	G	L	S	T	W	G	A	D	L	N	P	Q	.	.	.	.	.	A	C	A	N	L	L	A	E	G	A	C	G	A	A	A	S	A	R	E	F	A	G	V	V	D	A	L	V	I	L	V	V	N	A	A	Q	V	R	Q	V
Template Known Secondary structure											S													T	T								S				.	.	.	.	.								T	T		S				S	S	S	T	T	T	T	T	T		S							S	S
Template Predicted Secondary structure																																					.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40						.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		115	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure					.																								.	.	.
Query SS confidence					.																								.	.	.
Query Sequence		V	R	T	.	V	Q	P	L	M	K	D	G	A	A	L	G	Y	S	H	G	F	N	I	V	E	V	G	.	.	.	E	Q	I	R	K	D	I	T	V	V	M	V	A	P	K	C	P	G	T	E	V	R	E	E	Y	K	R	G	F	G	V	P	T	L	I	A	V	H	P	E	N	D	P	K	G	E	G	M	A	I
Query Conservation					.																								.	.	.
Alig confidence					.																								.	.	.																									.	.	.	.	.										.	.	.	.	.
Template Conservation																																																								.	.	.	.	.										.	.	.	.	.
Template Sequence		L	F	D	G	V	A	H	L	X	K	P	G	S	A	V	X	V	S	S	T	I	S	S	A	D	A	Q	E	I	A	A	A	L	T	A	L	N	L	N	X	L	D	A	P	V	S	G	G	A	V	K	A	A	Q	.	.	.	.	.	G	E	X	T	V	X	A	S	G	.	.	.	.	.	S	E	A	A	F	T	R
Template Known Secondary structure							G	G	G	S		T	T							S																T	T	T										S							T	.	.	.	.	.	T									.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.										.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.						.	.	.	.	.	140	.	.	.						.	.	.	.	.	.	150
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	A	W	A	A	A	T	G	G	H	R	A	G	V	L	E	S	S	F	V	A	E	V	K	S	D	L	M	G	E	Q	T	I	L	C	G	M	L	Q	A	G	S	L	L	C	F	D	K	L	V	E	E	G	T	D	P	A	Y	A	E
Query Conservation
Alig confidence													.																			.	.
Template Conservation													.																			.	.
Template Sequence		L	K	P	V	L	D	A	V	A	S	N	.	V	Y	R	I	S	D	T	P	G	A	G	S	T	V	K	I	I	H	.	.	Q	L	L	A	G	V	H	I	A	A	A	A	E	A	X	A	L	A	A	R	A	G	I	P	L	D	V	X	Y
Template Known Secondary structure													.						S	S	T	T										.	.																					T	T
Template Predicted Secondary structure													.																			.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions