Job Description P05793 Confidence 88.75% Date Thu Jan 5 10:58:54 GMT 2012 Rank 312 Aligned Residues 84 % Identity 15% Template c3fwzA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli Resolution 1.79 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90									.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.						.
Query SS confidence																																																					.	.	.	.	.	.	.	.						.
Query Sequence		V	V	I	V	G	C	G	A	Q	G	L	N	Q	G	L	N	M	R	D	S	G	L	D	I	S	Y	A	L	R	K	E	A	I	A	E	K	R	A	S	W	R	K	A	T	E	N	G	F	K	V	G	.	.	.	.	.	.	.	.	T	Y	E	E	L	.	I	P	Q	A	D	L	V	I	N	L	T	P	D	K	Q
Query Conservation																																																					.	.	.	.	.	.	.	.						.
Alig confidence																																	.	.	.	.	.	.															.	.	.	.	.	.	.	.						.
Template Conservation																																	.	.	.	.	.	.
Template Sequence		A	L	L	V	G	Y	G	R	V	G	S	L	L	G	E	K	L	L	A	S	D	I	P	L	V	V	I	E	T	S	R	.	.	.	.	.	.	T	R	V	D	E	L	R	E	R	G	V	R	A	V	L	G	N	A	A	N	E	E	I	X	Q	L	A	H	L	E	C	A	K	W	L	I	L	T	I	P	N	G	Y
Template Known Secondary structure								S													T	T								S			.	.	.	.	.	.									T	T						S		T	T	S							T	T	G	G	G		S							S
Template Predicted Secondary structure																																	.	.	.	.	.	.
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450							.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	D	V	V	R	T	V	Q	P	L	M	K	D	G	A	A	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	G	E	I	V	A	S	A	R	A	K	N	P	D	I	E	I	I
Template Known Secondary structure															S	S	S
Template Predicted Secondary structure
Template SS confidence
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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