 |
Job Description | P05793 | Confidence | 96.03% | Date | Thu Jan 5 10:58:54 GMT 2012 |
Rank | 179 | Aligned Residues | 83 |
% Identity | 17% | Template | c3e9mC_ |
PDB info |
PDB header:oxidoreductase | Chain: C: PDB Molecule:oxidoreductase, gfo/idh/moca family; |
PDBTitle: crystal structure of an oxidoreductase from enterococcus2 faecalis
|
Resolution | 2.70 Å |
|
 |
  |   |
39 | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | |
|
. | 90 | . | . | . | . | . | . | . | . | |
|
. | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  | . | . |  |
|
|  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | V | V | I | V | G | C | G | A | Q | G | L | N | Q | G | L | N | M | R | D | S | G | L | D | I | S | Y | A | L | R | K | E | A | I | A | E | K | R | A | S | W | R | K | A | T | E | N | G | F | K | . |
. |
V | G | T | Y | E | E | L | I | P | Q | . |
. |
A | D | L | V | I | N | L | T | P | D | K | Q | H | S | D | V |
Query Conservation |   |
  |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|   | . | . |
|   |   |   |   |
|
|
|   |   | . | . |
|
|
|
|   |   |
|   |
|
|
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|   |
|   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |
|   |
|   |
|
|   |   |   |
|   |   |   |
Template Sequence |   |
R | Y | G | I | X | S | T | A | Q | I | V | P | R | F | V | A | G | L | R | E | S | A | Q | A | E | V | R | G | I | A | S | R | R | . |
. |
. |
L | E | N | A | Q | K | X | A | K | E | L | A | I | P | V | A | Y | G | S | Y | E | E | L | C | K | D | E | T | I | D | I | I | Y | I | P | T | Y | N | Q | G | H | Y | S | A |
Template Known Secondary structure |   |
 |  |  |  |
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |
|
| S | S | . | . | . |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| B |
| S | S |  |  |  |  |  | T |
| T | T |
| S |  |  |  |  |
|
|
| T | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
|
|
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
115 | . | . | . | . | 120 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | R | T | V | Q | P | L | M | K | D |
Query Conservation |   |
|
|   |
|   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |
|
|   |
Template Sequence |   |
A | K | L | A | L | S | Q | G | K | P |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|