Return to main results Retrieve Phyre Job Id

Job DescriptionP05793
Confidence74.94%DateThu Jan 5 10:58:54 GMT 2012
Rank405Aligned Residues90
% Identity14%Templatec3do5A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of putative homoserine dehydrogenase (np_069768.1)2 from archaeoglobus fulgidus at 2.20 a resolution
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50......... 60.........70...... ...80.........90....... ..100.
Predicted Secondary structure 








.........









......




..


Query SS confidence 




















. . . . . . . . .
















. . . . . .




















. .



Query Sequence  KVVIVGCGAQGLNQGLNMRDS. . . . . . . . . GLDISYALRKEAIAEKR. . . . . . ASWRKATENGFKVGTYEELIP. . QADL
Query Conservation   









 








.........

 





  
     ...... 
   
  


 
    


 .. 


Alig confidence 




















.........
















......




















..



Template Conservation 





 
 

      
      
        



                              
  
 
    


Template Sequence  KIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRXKRETGXLRDDAKAIEVVRSADYDV
Template Known Secondary structure 

ST


SS
SS

SS
SB


S

S
Template Predicted Secondary structure 



























Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   102.......110.........120.........130.
Predicted Secondary structure 






Query SS confidence 





























Query Sequence  VINLTPDKQHSDVVRTVQPLMKDGAALGYS
Query Conservation 
  
 


 
  


 
 
 

 
  
 

Alig confidence 













...












Template Conservation 

  
         ...  


 






Template Sequence  LIEASVTREGVNYI. . . REALKRGKHVVTS
Template Known Secondary structure 





...TTT

Template Predicted Secondary structure 




...




Template SS confidence 





























   83......90...... ...100.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions