Job Description P05793 Confidence 99.32% Date Thu Jan 5 10:58:54 GMT 2012 Rank 11 Aligned Residues 247 % Identity 15% Template c3d1lB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative nadp oxidoreductase bf3122; PDBTitle: crystal structure of putative nadp oxidoreductase bf3122 from2 bacteroides fragilis Resolution 2.19 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																.																											.
Query SS confidence																																.																											.
Query Sequence		L	Q	G	K	K	V	V	I	V	G	C	G	A	Q	G	L	N	Q	G	L	N	M	R	D	S	G	L	D	I	S	.	Y	A	L	R	K	E	A	I	A	E	K	R	A	S	W	R	K	A	T	E	N	G	F	K	V	G	.	T	Y	E	E	L	I	P	Q	A	D	L	V	I	N	L	T	P	D	K	Q	H	S
Query Conservation																																.																											.
Alig confidence																																.								.	.	.	.	.															.
Template Conservation																																								.	.	.	.	.
Template Sequence		I	E	D	T	P	I	V	L	I	G	A	G	N	L	A	T	N	L	A	K	A	L	Y	R	K	G	F	R	I	V	Q	V	Y	S	R	T	E	E	.	.	.	.	.	S	A	R	E	L	A	Q	K	V	E	A	E	Y	T	T	D	L	A	E	V	N	P	Y	A	K	L	Y	I	V	S	L	K	D	S	A	F	A
Template Known Secondary structure		G	G	G									S													T	T									S	S			.	.	.	.	.									T	T					S		G	G	G	S		S			S
Template Predicted Secondary structure																																								.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	V	R	T	V	Q	P	L	M	K	D	G	A	A	L	G	Y	S	H	G	F	N	I	V	E	V	G	E	Q	I	R	K	D	I	T	V	V	M	V	A	P	K	C	P	G	T	E	V	R	E	E	Y	K	R	G	F	G	V	P	T	L	I	A	V	H	P	E	N	D	P	K	G	E	G	M	A	I	A	K
Query Conservation
Alig confidence																																																		.	.	.	.	.	.												.	.	.
Template Conservation																																																		.	.	.	.	.	.												.	.	.
Template Sequence		E	L	L	Q	G	I	V	E	G	K	R	E	E	A	L	X	V	H	T	A	G	S	I	P	X	N	V	W	E	G	H	V	P	H	Y	G	V	F	Y	P	X	Q	T	F	S	K	Q	R	.	.	.	.	.	.	E	V	D	F	K	E	I	P	F	F	I	.	.	.	E	A	S	S	T	E	D	A	A	F	L	K
Template Known Secondary structure									T	T			T	T								S	S	S		G	G	G	G	T	T	T		S	S								S			B	T	T	B	.	.	.	.	.	.				G	G	G						.	.	.			S	S
Template Predicted Secondary structure																																																		.	.	.	.	.	.												.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.							.	.	130	.	.	.	.	.	.	.	.				.	140	.	.	.	.	.	.	.	.	.	150
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		A	W	A	A	A	T	G	G	H	R	A	G	V	L	E	S	S	F	V	A	E	V	K	S	D	L	M	G	E	Q	T	I	L	.	C	G	M	L	Q	A	G	S	L	L	C	F	D	K	L	V	E	E	G	T	D	P	A	Y	A	E	K	L	I	Q	F	G	W	E	T	I	T	E	A	L	K	Q	G	G	I	T
Query Conservation																																			.
Alig confidence										.	.	.						.	.	.															.																											.	.	.	.	.	.	.
Template Conservation										.	.	.						.	.	.																																										.	.	.	.	.	.	.
Template Sequence		A	I	A	S	T	L	S	N	.	.	.	R	V	Y	D	A	.	.	.	D	S	E	Q	R	K	S	L	H	L	A	A	V	F	T	C	N	F	T	N	H	X	Y	A	L	A	A	E	L	L	K	K	Y	N	L	P	F	D	V	X	L	.	.	.	.	.	.	.	P	L	I	D	E	T	A	R	K	V	H	E	L
Template Known Secondary structure						T	T		S	.	.	.						.	.	.																																	T	T			G	G	G	G		.	.	.	.	.	.	.													S
Template Predicted Secondary structure										.	.	.						.	.	.																																										.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.				.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.								.	.	.	.	.	210	.	.	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.							.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.
Query Sequence		L	M	M	D	R	L	S	N	P	A	K	L	R	A	Y	A	L	S	E	Q	L	K	E	I	M	.	.	.	.	.	.	A	P	L	F	Q	K	H	M	D	D	I	I
Query Conservation																											.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.
Template Conservation
Template Sequence		E	P	K	T	A	Q	T	G	P	A	I	R	Y	D	E	N	V	I	G	N	H	L	R	X	L	A	D	D	P	A	X	Q	R	L	Y	E	L	L	S	R	S	I	H
Template Known Secondary structure									S	T	T	T	T	T												T	T	T
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions