Job Description P05793 Confidence 87.51% Date Thu Jan 5 10:58:54 GMT 2012 Rank 320 Aligned Residues 91 % Identity 21% Template c3c85A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative glutathione-regulated potassium-efflux system PDBTitle: crystal structure of trka domain of putative glutathione-regulated2 potassium-efflux kefb from vibrio parahaemolyticus Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90									.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.					.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.					.	.
Query Sequence		G	K	K	V	V	I	V	G	C	G	A	Q	G	L	N	Q	G	L	N	M	R	D	S	G	L	D	I	S	Y	A	L	R	K	E	A	I	A	E	K	R	A	S	W	R	K	A	T	E	N	G	F	K	V	G	.	.	.	.	.	.	.	.	T	Y	E	E	.	.	L	I	P	Q	A	D	L	V	I	N	L	T
Query Conservation																																																								.	.	.	.	.	.	.	.					.	.
Alig confidence																																					.	.	.	.	.															.	.	.	.	.	.	.	.					.	.
Template Conservation																																					.	.	.	.	.
Template Sequence		H	A	Q	V	L	I	L	G	X	G	R	I	G	T	G	A	Y	D	E	L	R	A	R	Y	G	K	I	S	L	G	I	E	I	R	E	.	.	.	.	.	E	A	A	Q	Q	H	R	S	E	G	R	N	V	I	S	G	D	A	T	D	P	D	F	W	E	R	I	L	D	T	G	H	V	K	L	V	L	L	A	X
Template Known Secondary structure		T		S							S																S							S			.	.	.	.	.									T	T								T	T							T	B		S
Template Predicted Secondary structure																																					.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.						70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		P	D	K	Q	H	S	D	V	V	.	R	T	V	Q	P	L	M	K	D	G	A	A	L	G	Y	S	H
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		P	H	H	Q	G	N	Q	T	A	L	E	Q	L	Q	R	R	N	Y	K	G	Q	I	A	A	I	A	E
Template Known Secondary structure		S	S														T	T			S							S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions