Job Description P05793 Confidence 60.19% Date Thu Jan 5 10:58:54 GMT 2012 Rank 499 Aligned Residues 216 % Identity 13% Template c3aogA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of glutamate dehydrogenase (gdhb) from thermus2 thermophilus (glu bound form) Resolution 2.10 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		R	D	E	F	A	D	G	A	S	Y	L	Q	G	K	K	V	V	I	V	G	C	G	A	Q	G	L	N	Q	G	L	N	M	R	D	S	G	L	D	I	S	.	Y	A	L	R	K	E	A	I	A	E	K	R	A	S	W	R	K	A	T	E	N	G	F	K	V	G	T	Y	E	E	L	I	P	Q	A	D	L	V	I
Query Conservation																																										.
Alig confidence																																										.								.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		A	A	A	A	E	K	I	G	L	Q	V	E	G	A	R	V	A	I	Q	G	F	G	N	V	G	N	A	A	A	R	A	F	H	D	H	G	A	R	V	V	A	V	Q	D	H	T	G	T	.	.	.	.	.	.	.	.	.	V	Y	N	E	A	G	I	D	P	Y	D	L	L	R	H	V	Q	E	F	G	G	.	.
Template Known Secondary structure									T			S	T	T									S													T	T									S	S			.	.	.	.	.	.	.	.	.				T	T														T	S	S	.	.
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.										.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	T	P	D	K	Q	H	S	D	V	V	R	T	V	Q	P	L	M	K	D	G	A	A	L	G	Y	S	H	G	F	N	I	V	E	V	G	E	Q	I	R	K	D	I	T	V	V	M	V	A	P	K	C	P	G	T	E	V	R	E	E	Y	K	R	G	F	G	V	P	T	L	I	A	V	H	P	E	N	D	P
Query Conservation
Alig confidence		.	.																																																																										.	.	.
Template Conservation		.	.																																																																										.	.	.
Template Sequence		.	.	V	R	G	Y	P	K	A	E	P	L	P	A	A	D	F	W	G	L	P	V	E	F	L	V	P	A	A	L	E	K	Q	I	T	E	Q	N	A	W	R	I	R	A	R	I	V	A	E	G	A	N	G	P	T	T	P	A	A	D	D	I	L	L	E	K	G	V	L	V	V	P	D	V	I	.	.	.	A	N
Template Known Secondary structure		.	.	S	T	T		T	T	S									T	T				S						S	S	S	S		B		T	T	T	G	G	G				S						S	S	S		B												T									.	.	.		T
Template Predicted Secondary structure		.	.																																																																										.	.	.
Template SS confidence
				276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.				.	350
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	E	G	M	A	I	A	K	A	W	A	A	A	T	G	G	H	R	A	G	V	L	E	S	S	F	V	A	E	V	K	S	D	L	M	G	E	Q	T	I	L	C	G	M	L	Q	A	G	S	L	L	C	F	D	K	L	V	E	E	G	T	D	P	A	Y	A	E	K	L	I	Q	F	G	W	E	T	I	T	E
Query Conservation
Alig confidence																					.	.	.	.	.									.	.	.	.	.	.	.	.																																.	.
Template Conservation																					.	.	.	.	.									.	.	.	.	.	.	.	.																																.	.
Template Sequence		A	G	G	V	T	V	S	Y	F	E	W	V	Q	D	F	N	S	Y	F	.	.	.	.	.	W	T	E	E	E	I	N	A	.	.	.	.	.	.	.	.	R	L	E	R	V	L	R	N	A	F	E	A	V	W	Q	V	A	Q	E	K	K	I	P	L	R	T	A	A	Y	V	V	.	.	A	A	T	R	V	L	E
Template Known Secondary structure		T														T	T	T			.	.	.	.	.									.	.	.	.	.	.	.	.																					T											.	.
Template Predicted Secondary structure																					.	.	.	.	.									.	.	.	.	.	.	.	.																																.	.
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.						370	.	.	.	.	.	.	.									.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.			.	410	.	.	.	.	.
		264	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	K	Q	G	G	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	A	L	R	G	L	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		416	.	.	.	420	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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