Job Description P05793 Confidence 61.23% Date Thu Jan 5 10:58:54 GMT 2012 Rank 491 Aligned Residues 209 % Identity 15% Template c3aoeC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of hetero-hexameric glutamate dehydrogenase from2 thermus thermophilus (leu bound form) Resolution 2.60 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		R	D	E	F	A	D	G	A	S	Y	L	Q	G	K	K	V	V	I	V	G	C	G	A	Q	G	L	N	Q	G	L	N	M	R	D	S	G	L	D	I	S	.	Y	A	L	R	K	E	A	I	A	E	K	R	A	S	W	R	K	A	T	E	N	G	F	K	V	G	T	Y	E	E	L	I	P	Q	A	D	L	V	I
Query Conservation																																										.
Alig confidence																																										.								.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.
Template Sequence		E	A	L	A	K	R	R	G	L	D	L	R	G	A	R	V	V	V	Q	G	L	G	Q	V	G	A	A	V	A	L	H	A	E	R	L	G	M	R	V	V	A	V	A	T	S	M	G	G	.	.	.	.	.	.	.	.	.	M	Y	A	P	E	G	L	D	V	A	E	V	L	S	A	Y	E	A	T	G	S	L	P
Template Known Secondary structure								T	T				T	T									S													T	T									T	T			.	.	.	.	.	.	.	.	.				T	T															S	S		S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.										.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		104			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		N	.	.	L	T	P	D	K	Q	H	S	D	V	V	R	T	V	Q	P	L	M	K	D	G	A	A	L	G	Y	S	H	G	F	N	I	V	E	V	G	E	Q	I	R	K	D	I	T	V	V	M	V	A	P	K	C	P	G	T	E	V	R	E	E	Y	K	R	G	F	G	V	P	T	L	I	A	V	H	P	E	N
Query Conservation			.	.
Alig confidence			.	.						.	.	.	.	.	.	.	.	.	.																																																												.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.																																																												.	.	.
Template Sequence		R	L	D	L	A	P	E	E	.	.	.	.	.	.	.	.	.	.	V	F	G	L	E	A	E	V	L	V	L	A	A	R	E	G	A	L	D	G	D	R	A	R	Q	V	Q	A	Q	A	V	V	E	V	A	N	F	G	L	N	P	E	A	E	A	Y	L	L	G	K	G	A	L	V	V	P	D	L	L	.	.	.
Template Known Secondary structure					B		G	G	G	.	.	.	.	.	.	.	.	.	.	S	T	T	S	S		S						S	S	S	S		B						T	T				S						S	T	T		B											T	T									.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.																																																												.	.	.
Template SS confidence
		277	.	.	280	.	.	.	.											.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	K	G	E	G	M	A	I	A	K	A	W	A	A	A	T	G	G	H	R	A	G	V	L	E	S	S	F	V	A	E	V	K	S	D	L	M	G	E	Q	T	I	L	C	G	M	L	Q	A	G	S	L	L	C	F	D	K	L	V	E	E	G	T	D	P	A	Y	A	E	K	L	I	Q	F	G	W	E	T	I
Query Conservation
Alig confidence																										.	.	.	.	.	.							.	.	.	.	.	.	.																															.	.
Template Conservation																										.	.	.	.	.	.							.	.	.	.	.	.	.																															.	.
Template Sequence		S	G	G	G	G	L	L	A	S	Y	L	E	W	V	Q	D	L	N	M	F	F	W	S	P	.	.	.	.	.	.	E	E	V	R	E	R	.	.	.	.	.	.	.	F	E	T	R	V	A	R	V	V	D	A	V	C	R	R	A	E	R	G	G	L	D	L	R	M	G	A	L	A	L	.	.	A	L	E	R	L
Template Known Secondary structure			T																	T						.	.	.	.	.	.							.	.	.	.	.	.	.																				T											.	.
Template Predicted Secondary structure																										.	.	.	.	.	.							.	.	.	.	.	.	.																															.	.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.							.	.	370	.	.	.								.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.			.	.	.	.	.
		262	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	A	L	K	Q	G	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	A	T	R	L	R	G	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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