Job Description P05793 Confidence 96.61% Date Thu Jan 5 10:58:54 GMT 2012 Rank 154 Aligned Residues 113 % Identity 19% Template c2yv1A_ PDB info PDB header:ligase Chain: A: PDB Molecule:succinyl-coa ligase [adp-forming] subunit alpha; PDBTitle: crystal structure of succinyl-coa synthetase alpha chain from2 methanocaldococcus jannaschii dsm 2661 Resolution 1.70 Å

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		36	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure												.																																														.									.	.
Query SS confidence												.																																														.									.	.
Query Sequence		Q	G	K	K	V	V	I	V	G	C	.	G	A	Q	G	L	N	Q	G	L	N	M	R	D	S	G	L	D	I	S	Y	A	L	R	K	E	A	I	A	E	K	R	A	S	W	R	K	A	T	E	N	G	F	K	V	G	.	T	Y	E	E	L	I	P	Q	.	.	A	D	L	V	I	N	L	T	P	D	K	Q	H
Query Conservation												.																																														.									.	.
Alig confidence												.																											.	.	.	.	.		.	.	.											.									.	.
Template Conservation																																							.	.	.	.	.		.	.	.
Template Sequence		E	N	T	K	A	I	V	Q	G	I	T	G	R	Q	G	S	F	H	T	K	K	M	L	E	C	G	T	K	I	V	G	G	V	T	P	G	K	.	.	.	.	.	G	.	.	.	G	Q	N	V	H	G	V	P	V	F	D	T	V	K	E	A	V	K	E	T	D	A	N	A	S	V	I	F	V	P	A	P	F	A
Template Known Secondary structure		T	T							T	T	T	S													T	T									T	T		.	.	.	.	.	T	.	.	.	T				T	T					S	S
Template Predicted Secondary structure																																							.	.	.	.	.		.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.						.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		112	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure						.																								.	.
Query SS confidence						.																								.	.
Query Sequence		S	D	V	V	.	R	T	V	Q	P	L	M	K	D	G	A	A	L	G	Y	S	H	G	F	N	I	V	E	.	.	V	G	E	Q	I	R	K	D	I	T	V	V	M	V	A	P	K	C	P	G
Query Conservation						.																								.	.
Alig confidence						.					.	.																		.	.
Template Conservation											.	.
Template Sequence		K	D	A	V	F	E	A	I	D	.	.	A	G	I	E	L	I	V	V	I	T	E	H	I	P	V	H	D	T	M	E	F	V	N	Y	A	E	D	V	G	V	K	I	I	G	P	N	T	P	G
Template Known Secondary structure											.	.	T	T		S							S																		T						S	S
Template Predicted Secondary structure											.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions