Job Description P05793 Confidence 98.66% Date Thu Jan 5 10:58:54 GMT 2012 Rank 22 Aligned Residues 260 % Identity 14% Template c2pv7B_ PDB info PDB header:isomerase, oxidoreductase Chain: B: PDB Molecule:t-protein [includes: chorismate mutase (ec 5.4.99.5) (cm) PDBTitle: crystal structure of chorismate mutase / prephenate dehydrogenase2 (tyra) (1574749) from haemophilus influenzae rd at 2.00 a resolution Resolution 2.00 Å

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		38	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		K	K	V	V	I	V	.	G	C	G	A	Q	G	L	N	Q	G	L	N	M	R	D	S	G	L	D	I	S	Y	A	L	R	K	E	A	I	A	E	K	R	A	S	W	R	K	A	T	E	N	G	F	K	V	G	T	Y	E	E	L	I	P	Q	A	D	L	V	I	N	L	T	P	D	K	Q	H	S	D	V	V	R
Query Conservation								.
Alig confidence								.																													.	.	.	.	.		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	K	I	V	I	V	G	G	Y	G	K	L	G	G	L	F	A	R	Y	L	R	A	S	G	Y	P	I	S	I	L	D	R	E	D	W	.	.	.	.	.	A	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	E	S	I	L	A	N	A	D	V	V	I	V	S	V	P	I	N	L	T	L	E	T	I	E
Template Known Secondary structure								T	T	T	S													T	T								T	T		G	.	.	.	.	.	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G						T	T		S								G	G	G
Template Predicted Secondary structure																																					.	.	.	.	.		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.						.														.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		T	V	Q	P	L	M	K	D	G	A	A	L	G	Y	S	H	G	.	.	F	N	I	V	E	V	G	E	Q	I	R	K	D	I	T	V	V	M	V	A	P	K	C	P	G	T	E	V	R	E	E	Y	K	R	G	F	G	V	P	T	L	I	A	V	H	P	E	N	D	P	K	G	E	G	M	A	I	A	K	A	W
Query Conservation																			.	.
Alig confidence																			.	.																											.	.	.	.	.	.	.												.	.	.
Template Conservation																																															.	.	.	.	.	.	.												.	.	.
Template Sequence		R	L	K	P	Y	L	T	E	N	X	L	L	A	D	L	T	S	V	K	R	E	P	L	A	K	X	L	E	V	H	T	G	A	V	L	G	L	H	P	X	F	G	A	D	I	.	.	.	.	.	.	.	A	S	X	A	K	Q	V	V	V	R	C	.	.	.	D	G	R	F	P	E	R	Y	E	W	L	L	E	Q
Template Known Secondary structure				G	G	G			T	T	S							S														S	S								S	S		T	T		.	.	.	.	.	.	.	S			T	T							.	.	.					G	G	G	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.												.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.								.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.			.	270	.
Predicted Secondary structure																																													.																																.	.
Query SS confidence																																													.																																.	.
Query Sequence		A	A	A	T	G	G	H	R	A	G	V	L	E	S	S	F	V	A	E	V	K	S	D	L	M	G	E	Q	T	I	L	C	G	M	L	Q	A	G	S	L	L	C	F	.	D	K	L	V	E	E	G	T	D	P	A	Y	A	E	K	L	I	Q	F	G	W	E	T	I	T	E	A	L	K	Q	G	.	.	G	I	T
Query Conservation																																													.																																.	.
Alig confidence								.	.	.										.	.	.	.	.	.																				.																																.	.
Template Conservation								.	.	.										.	.	.	.	.	.
Template Sequence		I	Q	I	W	G	A	.	.	.	K	I	Y	Q	T	N	A	T	E	.	.	.	.	.	.	H	D	H	N	X	T	Y	I	Q	A	L	R	H	F	S	T	F	A	N	G	L	H	L	S	K	Q	P	I	N	L	A	N	L	L	A	L	S	S	P	I	Y	R	L	E	L	A	X	I	G	R	L	F	A	Q	D	A
Template Known Secondary structure					T	T		.	.	.										.	.	.	.	.	.									T																T	S	S									T														G	G	G	G	S
Template Predicted Secondary structure								.	.	.										.	.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.				.	240	.	.	.	.	.	.	.							.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310				.	.	.	.	.	.				.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.							.	.	.
Query SS confidence																																									.	.	.							.	.	.
Query Sequence		L	M	M	D	R	L	S	N	P	A	K	L	R	A	Y	A	L	S	E	Q	L	K	E	I	M	A	P	L	F	Q	K	H	M	D	D	I	I	S	G	.	.	.	E	F	S	S	G	M	.	.	.	M	A	D	W	A	N	D	D	K	K	L	L	T	W	R	E	E	T	G	K	T	A	F
Query Conservation																																									.	.	.							.	.	.
Alig confidence																			.	.	.	.	.																		.	.	.							.	.	.
Template Conservation																			.	.	.	.	.
Template Sequence		E	L	Y	A	D	I	I	X	D	K	S	E	N	L	A	V	I	.	.	.	.	.	E	T	L	K	Q	T	Y	D	E	A	L	T	F	F	E	N	N	D	R	Q	G	F	I	D	A	F	H	K	V	R	D	W	F	G	D	Y	S	E	Q	F	L	K	E	S	R	Q	L	L	Q	Q	A	Y
Template Known Secondary structure									T	T									.	.	.	.	.																T	T																	T	T																.
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320						.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions