Return to main results Retrieve Phyre Job Id

Job DescriptionP05793
Confidence63.05%DateThu Jan 5 10:58:54 GMT 2012
Rank476Aligned Residues69
% Identity22%Templatec2o7qA_
PDB info PDB header:oxidoreductase,transferaseChain: A: PDB Molecule:bifunctional 3-dehydroquinate dehydratase/shikimate PDBTitle: crystal structure of the a. thaliana dhq-dehydroshikimate-sdh-2 shikimate-nadp(h)
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60.........70.........80.........90...... ...100.......
Predicted Secondary structure 


























..




Query SS confidence 































































. .










Query Sequence  SYLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELI. . PQADLVINLTP
Query Conservation 
 



 









 










 





  
      
   
  


 
    


..  



  
 
Alig confidence 



























.









.....



















..










Template Conservation    
    


 



 


   

   
. 
 
 

   .....

  

                   






 
Template Sequence  AIEDGLTVVVIGAGGAGKALAYGAKEKA. KVVIANRTYE. . . . . RALELAEAIGGKALSLTDLDNYEDGMVLANTTS
Template Known Secondary structure 



ST

.
SS.....TTTT
GGGTT



S
SS
Template Predicted Secondary structure 







.

.....














Template SS confidence 












































































   430.........440.........450....... ..460....... ..470.........480.........490.........500
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions