Job Description P05793 Confidence 98.03% Date Thu Jan 5 10:58:54 GMT 2012 Rank 70 Aligned Residues 196 % Identity 17% Template c2gf2B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:3-hydroxyisobutyrate dehydrogenase; PDBTitle: crystal structure of human hydroxyisobutyrate dehydrogenase Resolution 2.38 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		K	V	V	I	V	G	C	G	A	Q	G	L	N	Q	G	L	N	M	R	D	S	G	L	D	I	S	Y	A	L	R	K	E	A	I	A	E	K	R	A	S	W	R	K	A	T	E	N	G	F	K	V	G	.	T	Y	E	E	L	I	P	Q	A	D	L	V	I	N	L	T	P	D	K	Q	H	S	D	V	V	R	T
Query Conservation																																																						.
Alig confidence																																		.	.	.	.	.	.															.
Template Conservation																																		.	.	.	.	.	.
Template Sequence		P	V	G	F	I	G	L	G	N	M	G	N	P	M	A	K	N	L	M	K	H	G	Y	P	L	I	I	Y	D	V	F	P	.	.	.	.	.	.	D	A	C	K	E	F	Q	D	A	G	E	Q	V	V	S	S	P	A	D	V	A	E	K	A	D	R	I	I	T	M	L	P	T	S	I	N	A	I	E	A	Y	S
Template Known Secondary structure									S	T	T											T	T								S	S	T	.	.	.	.	.	.								T	T	T					S	S									S							S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.							.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
						118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure		.	.	.	.																									.	.	.
Query SS confidence		.	.	.	.																									.	.	.
Query Sequence		.	.	.	.	V	Q	P	L	M	K	D	G	A	A	L	G	Y	S	H	G	F	N	I	V	E	V	G	E	.	.	.	Q	I	R	K	D	I	T	V	V	M	V	A	P	K	C	P	G	T	E	V	R	E	E	Y	K	R	G	F	G	V	P	T	L	I	A	V	H	P	E	N	D	P	K	G	E	G	M	A	I
Query Conservation		.	.	.	.																									.	.	.
Alig confidence		.	.	.	.																									.	.	.																								.	.	.	.	.	.								.	.	.	.
Template Conservation																																																								.	.	.	.	.	.								.	.	.	.
Template Sequence		G	A	N	G	I	L	K	K	V	K	K	G	S	L	L	I	D	S	S	T	I	D	P	A	V	S	K	E	L	A	K	E	V	E	K	M	G	A	V	F	M	D	A	P	V	S	G	G	V	G	A	A	R	S	.	.	.	.	.	.	G	N	L	T	F	M	V	.	.	.	.	G	G	V	E	D	E	F	A	A
Template Known Secondary structure		S	T	T		G	G	G	T			T	T							S																	T	T										S								.	.	.	.	.	.	T							.	.	.	.		S		G	G	G
Template Predicted Secondary structure																																																								.	.	.	.	.	.								.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.							.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	A	W	A	A	A	T	G	G	H	R	A	G	V	L	E	S	S	F	V	A	E	V	K	S	D	L	M	G	E	Q	T	I	L	C	G	M	L	Q	A	G	S	L	L	C	F	D	K	L	V	E	E	G	T	D	P	A	Y	A	E	K	L	I
Query Conservation
Alig confidence													.	.																		.	.
Template Conservation													.	.																		.	.
Template Sequence		A	Q	E	L	L	G	C	M	G	S	N	.	.	V	V	Y	C	G	A	V	G	T	G	Q	A	A	K	I	C	N	.	.	N	M	L	L	A	I	S	M	I	G	T	A	E	A	M	N	L	G	I	R	L	G	L	D	P	K	L	L	A	K	I	L
Template Known Secondary structure							T	T	T				.	.						S	T	T										.	.																					T	T
Template Predicted Secondary structure													.	.																		.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions