Job Description P05793 Confidence 96.07% Date Thu Jan 5 10:58:54 GMT 2012 Rank 178 Aligned Residues 109 % Identity 17% Template c2fpgA_ PDB info PDB header:ligase Chain: A: PDB Molecule:succinyl-coa ligase [gdp-forming] alpha-chain, PDBTitle: crystal structure of pig gtp-specific succinyl-coa2 synthetase in complex with gdp Resolution 2.96 Å

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		36	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90							.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.
Predicted Secondary structure												.																																														.	.	.	.	.	.									.	.
Query SS confidence												.																																														.	.	.	.	.	.									.	.
Query Sequence		Q	G	K	K	V	V	I	V	G	C	.	G	A	Q	G	L	N	Q	G	L	N	M	R	D	S	G	L	D	I	S	Y	A	L	R	K	E	A	I	A	E	K	R	A	S	W	R	K	A	T	E	N	G	F	K	V	G	.	.	.	.	.	.	T	Y	E	E	L	I	P	Q	.	.	A	D	L	V	I	N	L	T
Query Conservation												.																																														.	.	.	.	.	.									.	.
Alig confidence												.																										.	.	.	.	.	.			.	.	.	.	.	.	.						.	.	.	.	.	.									.	.
Template Conservation																																						.	.	.	.	.	.			.	.	.	.	.	.	.
Template Sequence		K	N	T	K	V	I	C	Q	G	F	T	G	K	Q	G	T	F	H	S	Q	Q	A	L	E	Y	G	T	N	L	V	G	G	T	T	P	G	.	.	.	.	.	.	K	G	.	.	.	.	.	.	.	G	K	T	H	L	G	L	P	V	F	N	T	V	K	E	A	K	E	Q	T	G	A	T	A	S	V	I	Y	V
Template Known Secondary structure		T	T							T	T	T	S														T									T	T	.	.	.	.	.	.		T	.	.	.	.	.	.	.	T				T	T					S												S
Template Predicted Secondary structure																																						.	.	.	.	.	.			.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.							50	.								.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		P	D	K	Q	H	S	D	V	V	R	T	V	Q	P	L	M	K	D	G	A	A	L	G	Y	S	H	G	F	N	I	V	E	V	G	E	.	.	.	Q	I	R	K	D	I	T	V	V	M	V	A	P	K	C	P	G
Query Conservation																																					.	.	.
Alig confidence																	.																				.	.	.
Template Conservation																	.
Template Sequence		P	P	P	F	A	A	A	A	I	N	E	A	I	D	A	.	E	V	P	L	V	V	C	I	T	E	G	I	P	Q	Q	D	M	V	R	V	K	H	R	L	L	R	Q	G	K	T	R	L	I	G	P	N	C	P	G
Template Known Secondary structure																T	.	T		S							S																T		S	S						S	S	S
Template Predicted Secondary structure																	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions