Return to main results Retrieve Phyre Job Id

Job DescriptionP05793
Confidence97.92%DateThu Jan 5 10:58:54 GMT 2012
Rank88Aligned Residues109
% Identity25%Templatec2cukC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:glycerate dehydrogenase/glyoxylate reductase; PDBTitle: crystal structure of tt0316 protein from thermus thermophilus hb8
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  NLRQQLAQLGKCRFMGRDEFADGASYLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFK
Query Conservation                
 
  
    
 



 









 










 





  
      
   
  


 
Alig confidence 






























































............




Template Conservation             
 
            
 

 




 
 

  

  
  

  
   
    ............     
Template Sequence  RVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPK. . . . . . . . . . . . PLPYP
Template Known Secondary structure  TTT





TTTT




TT
S
STT

SS

............S
SS
Template Predicted Secondary structure 




























............



Template SS confidence 















































































   116...120.........130.........140.........150.........160.........170........ .180...
 
   8990.........100.........110..... ....120.........
Predicted Secondary structure 






..




Query SS confidence 


























. .













Query Sequence  VGTYEELIPQADLVINLTPDKQHSDVV. . RTVQPLMKDGAALG
Query Conservation 
    


  



  
 


 
  

..
 
 
 

 
  
 
Alig confidence 


























..













Template Conservation     
 
 
  



    


  
  

    
  

 

 

Template Sequence  FLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILL
Template Known Secondary structure  B


S




TTTTT
B
TTS
TT
Template Predicted Secondary structure 






















Template SS confidence 










































   184.....190.........200.........210.........220......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions