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Job DescriptionP05793
Confidence97.09%DateThu Jan 5 10:58:54 GMT 2012
Rank138Aligned Residues215
% Identity16%Templatec1zejA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-hydroxyacyl-coa dehydrogenase; PDBTitle: crystal structure of the 3-hydroxyacyl-coa dehydrogenase (hbd-9,2 af2017) from archaeoglobus fulgidus dsm 4304 at 2.00 a resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60...... ...70.........80.........90.........100....... ..110.....
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Query Sequence  KVVIVGCGAQGLNQGLNMRDSGLDISYA. LRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTP. . DKQHSDVV
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Template Sequence  KVFVIGAGLXGRGIAIAIA. SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEKVKDCDIVXEAVFEDLNTKVEVL
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S.TTS
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   2.......10.........20 .........30.........40.........50.........60.........70.........80
 
   116...120.........130.. .......140.........150.........160.........170.........180.........190....
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Query Sequence  RTVQPLMKDGAALGYSH. GFNIVEVGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPENDPKGEGMAIAKAW
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Template Sequence  REVERL. . TNAPLCSNTSVISVDDIAERLDSPSRFLGVHWXNPPHVXP. . . . . . . . . . . LVEIVISRFTDSKTVAFVEGF
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   81..... ...90.........100.........110.........120...... ...130.........140.......
 
   195....200.........210.........220.........230.........240.........250.........260 ........
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Query Sequence  AAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCFDKLVEEGTDPAYAEKLIQFGWET. . . . . . ITEALKQG
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Template Sequence  LRELGKE. VVVCKGQS. . . . . . . . . . . . . LVNRFNAAVLSEASR. XIEEGVRAEDVDRVWKHHLGLLYTLFGPLGNLDYI
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   148.150.... .....160.. .......170....... ..180.........190.........200.........210..
 
   269270.........280..
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Query Sequence  GITLMMDRLSNPAK
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Template Sequence  GLDVAYYASLYLYK
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   213......220......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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