Job Description P05793 Confidence 86.81% Date Thu Jan 5 10:58:54 GMT 2012 Rank 328 Aligned Residues 67 % Identity 24% Template c1nvtA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5'-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe or2 mj1084) in complex with nadp+ Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.											.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Q	G	K	K	V	V	I	V	G	C	G	A	Q	G	L	N	Q	G	L	N	M	R	D	S	G	L	D	I	S	Y	A	L	R	K	E	A	I	A	E	K	R	A	S	W	R	K	A	T	.	.	.	.	.	.	.	.	.	.	E	N	G	F	K	V	G	T	Y	E	E	L	I	P	Q	A	D	L	V	I	N
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																												.											.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Template Conservation																												.											.	.	.	.	.
Template Sequence		V	K	D	K	N	I	V	I	Y	G	A	G	G	A	A	R	A	V	A	F	E	L	A	K	D	N	.	N	I	I	I	A	N	R	T	V	E	.	.	.	.	.	K	A	E	A	L	A	K	E	I	A	E	K	L	N	K	K	F	G	E	E	V	K	F	S	G	L	D	V	D	L	D	G	V	D	I	I	I	N
Template Known Secondary structure				S									S											T	S	S	S	.							S	S			.	.	.	.	.														T												T	T				T	T
Template Predicted Secondary structure																												.											.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.						.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		105	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	P
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		200	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions