Phyre 2 alignment of P05793 with c1npyA

Job Description P05793
Confidence 76.11% Date Thu Jan 5 10:58:54 GMT 2012

Rank 394 Aligned Residues 66

% Identity 24% Template c1npyA_

PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical shikimate 5-dehydrogenase-like PDBTitle: structure of shikimate 5-dehydrogenase-like protein hi0607

Resolution 1.75 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence	Q	G	K	K	V	V	I	V	G	C	G	A	Q	G	L	N	Q	G	L	N	M	R	D	S	G	L	.	D	I	S	Y	A	L	R	K	E	A	I	A	E	K	R	A	S	W	R	K	A	T	E	N	G	F	K	V	G	T	Y	E	E	L	I	P	Q	A	D	L	V	I	N	L	T	P
Query Conservation																											.
Alig confidence																											.											.	.	.	.	.																			.
Template Conservation																																						.	.	.	.	.																			.
Template Sequence	K	N	A	K	V	I	V	H	G	S	G	G	M	A	K	A	V	V	A	A	F	K	N	S	G	F	E	K	L	K	I	Y	A	R	N	V	K	.	.	.	.	.	T	G	Q	Y	L	A	A	L	Y	G	Y	A	Y	I	N	S	L	E	.	N	Q	Q	A	D	I	L	V	N	V	T	S
Template Known Secondary structure	T	T	S							S	S	T	T											T	T									S				.	.	.	.	.										T					S			T	.	T				S						S	S
Template Predicted Secondary structure																																						.	.	.	.	.																			.
Template SS confidence
	118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.						.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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