Job Description P05793 Confidence 96.50% Date Thu Jan 5 10:58:54 GMT 2012 Rank 163 Aligned Residues 92 % Identity 15% Template c1mv8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:gdp-mannose 6-dehydrogenase; PDBTitle: 1.55 a crystal structure of a ternary complex of gdp-mannose2 dehydrogenase from psuedomonas aeruginosa Resolution 1.55 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.															.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query Sequence		K	V	V	I	V	G	C	G	A	Q	G	L	N	Q	G	L	N	M	R	D	S	G	L	D	I	S	Y	A	L	R	K	E	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	K	R	A	S	W	R	K	A	T	E	N	G	F	K	V	G	T	.	Y	E	E	L	I	P	Q	A	D	L	V	I
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence		R	I	S	I	F	G	L	G	Y	V	G	A	V	C	A	G	C	L	S	A	R	G	H	E	V	I	G	V	D	V	S	S	T	K	I	D	L	I	N	Q	G	K	S	P	I	V	E	P	G	L	E	A	L	L	Q	Q	G	R	Q	T	G	R	L	S	G	T	T	D	F	K	K	A	V	L	D	S	D	V	S	F
Template Known Secondary structure									S	T	T											T	T								S										T	T			S	S			T	T											T	T						S								T		S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		104	.	.	.	.											.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.																			.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.																			.	.	.
Query Sequence		N	L	T	P	D	.	.	.	.	.	.	.	.	.	.	K	Q	H	S	D	V	V	R	T	V	Q	P	L	M	K	D	G	A	.	.	.	A	L	G	Y
Query Conservation							.	.	.	.	.	.	.	.	.	.																			.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation
Template Sequence		I	C	V	G	T	P	S	K	K	N	G	D	L	D	L	G	Y	I	E	T	V	C	R	E	I	G	F	A	I	R	E	K	S	E	R	H	T	V	V	V
Template Known Secondary structure								B		T	T	S	S	B																	T	T			S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions