Phyre 2 alignment of P0A9H5 with c3luaA

Job Description P0A9H5
Confidence 25.00% Date Thu Jan 5 11:10:13 GMT 2012

Rank 433 Aligned Residues 60

% Identity 15% Template c3luaA_

PDB info PDB header:transcription regulator Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of a signal receiver domain of two component signal2 transduction (histidine kinase) from clostridium thermocellum

Resolution 2.40 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure											.																																					.	.	.
Query SS confidence											.																																					.	.	.
Query Sequence	Q	H	A	K	R	M	L	A	D	S	.	S	L	D	M	V	L	L	D	E	L	T	Y	M	V	A	Y	D	Y	L	P	L	E	E	V	V	Q	A	L	N	E	R	P	H	Q	Q	T	.	.	.	V	I	I	T	G	R	G	C	H	R	D	I	L	E	L	A	D	T
Query Conservation											.																																					.	.	.
Alig confidence											.													.	.	.	.																					.	.	.
Template Conservation																								.	.	.	.
Template Sequence	K	K	F	Y	S	I	F	K	D	L	D	S	I	T	L	I	I	X	D	I	A	F	P	.	.	.	.	V	E	K	E	G	L	E	V	L	S	A	I	R	N	N	S	R	T	A	N	T	P	V	I	I	A	T	K	S	D	N	P	G	Y	R	H	A	A	L	K	F
Template Known Secondary structure					T	T	T	T	T					S						S		S	S	.	.	.	.	S														S	G	G	G	T	T								S													S
Template Predicted Secondary structure																								.	.	.	.
Template SS confidence
	37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100

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Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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