Job Description P0A9H5 Confidence 40.62% Date Thu Jan 5 11:10:13 GMT 2012 Rank 343 Aligned Residues 135 % Identity 16% Template c3iytG_ PDB info PDB header:apoptosis Chain: G: PDB Molecule:apoptotic protease-activating factor 1; PDBTitle: structure of an apoptosome-procaspase-9 card complex Resolution 9.50 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.
Query SS confidence																																									.	.	.	.
Query Sequence		Q	R	V	K	E	K	V	D	A	R	V	A	Q	A	Q	D	E	R	G	I	I	I	V	F	T	G	N	G	K	G	K	T	T	A	A	F	G	T	A	.	.	.	.	T	R	A	V	G	H	G	K	K	V	G	V	V	Q	F	I	K	G	T	W	P	N	G	E	R	N	L	L	E	P	H	G	V	E	F	Q	V
Query Conservation																																									.	.	.	.
Alig confidence																																									.	.	.	.																		.
Template Conservation																																																														.
Template Sequence		K	K	L	V	N	A	I	Q	Q	K	L	S	K	L	K	G	E	P	G	W	V	T	I	H	G	M	A	G	C	G	K	S	V	L	A	A	E	A	V	R	D	H	S	L	L	E	G	C	F	P	G	G	V	H	W	V	S	V	G	K	.	Q	D	K	S	G	L	L	M	K	L	Q	N	L	C	T	R	L	D	Q
Template Known Secondary structure													T	T	S	T	T	S										T	T	S	S																				T	T									S	.																			S
Template Predicted Secondary structure																																																														.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	T	G	F	T	W	D	T	Q	N	R	E	S	D	T	A	A	C	R	E	V	W	Q	H	A	K	R	M	L	A	D	S	S	L	D	M	V	L	L	D	E	L	T	Y	M	V	A	Y	D	Y	L	P	L	E	E	V	V	Q	A	L	N	E	R	P	H	Q	Q	T	V	I	I	T	G	R	G	C	H
Query Conservation
Alig confidence																										.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	E	S	F	S	Q	R	L	P	L	N	I	E	E	A	K	D	R	L	R	I	L	M	L	.	.	.	.	.	.	R	K	H	P	R	S	L	L	I	L	D	D	V	.	.	.	.	.	.	.	.	.	.	.	.	W	D	S	W	V	L	K	A	F	D	S	Q	C	Q	I	L	L	T	T	R	D	K	S
Template Known Secondary structure		S			S		S	S				S														.	.	.	.	.	.		T		T	T									.	.	.	.	.	.	.	.	.	.	.	.								T	T		S	S								S		G	G
Template Predicted Secondary structure																										.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.							.	.	.	.	.	.	.	240	.	.	.	.	.													.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions