Job Description P0A9H5 Confidence 95.97% Date Thu Jan 5 11:10:13 GMT 2012 Rank 44 Aligned Residues 116 % Identity 24% Template c3e2iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidine kinase; PDBTitle: crystal structure of thymidine kinase from s. aureus Resolution 2.01 Å

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		29	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		G	I	I	I	V	F	T	G	.	N	G	K	G	K	T	T	A	A	F	G	T	A	T	R	A	V	G	H	G	K	K	V	G	V	V	Q	F	I	K	G	T	W	P	N	G	E	R	N	L	L	E	P	H	G	V	E	F	Q	V	M	A	T	G	F	T	W	D	T	Q	N	R	E	S	D	T	A	A	C	R	E
Query Conservation										.
Alig confidence										.																											.	.	.								.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.								.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Sequence		G	W	I	E	C	I	T	G	S	X	F	S	G	K	S	E	E	L	I	R	R	L	R	R	G	I	Y	A	K	Q	K	V	V	V	F	.	.	.	K	P	A	S	H	N	G	.	.	.	.	.	.	.	N	A	I	E	A	I	N	I	S	K	A	S	E	I	X	T	H	D	L	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T	S																T	T							.	.	.					B	T	T	.	.	.	.	.	.	.	B								S	S	G	G	G	G	G	G	S			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.								.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.								50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.										.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.
Query Sequence		V	W	Q	H	A	K	R	M	L	A	D	S	S	L	D	M	V	L	L	D	E	L	T	Y	M	V	A	Y	D	Y	L	P	L	E	E	V	V	Q	A	L	N	E	R	P	H	Q	Q	T	V	I	I	T	G	R	G	C	H	.	.	.	.	.	.	.	.	.	R	D	I	L	E	L	A	D	T	V	S	E	L	R
Query Conservation																																																											.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	T	N	V	D	V	I	G	I	D	E	V	Q	F	.	.	.	.	.	.	F	D	D	E	I	V	S	I	V	E	K	L	S	A	D	G	H	R	V	I	V	A	G	L	D	X	D	F	R	G	E	P	F	E	P	X	P	K	L	X	A	V	S	E	Q	V	T	K	L	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	T	T		S							G	G	G	.	.	.	.	.	.	S		T												T	T									S	B		T	T	S		B		T	T									S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template SS confidence
													80	.	.	.	.	.	.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		179	180
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		143	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions