Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9H5
Confidence57.95%DateThu Jan 5 11:10:13 GMT 2012
Rank271Aligned Residues113
% Identity12%Templatec2zj2A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative ski2-type helicase; PDBTitle: archaeal dna helicase hjm apo state in form 1
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50... ......60....... ..70.........80.........90.
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Query Sequence  EKVDARVAQAQDERGIIIVFTGNGKGKTTAAFGTATRAV. GHGKKVGVVQFIKG. . TWPNGERNLLEPHGVEFQVMATGF
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Template Sequence  PPQAEALKSGILEGKNALISIPTASGKTLIAEIAMVHRILTQGGKAVYIVPLKALAEEKFQEFQDWEKIGLRVAMATGDY
Template Known Secondary structure  TTTGGGT
S
GGGT
SSSTTSTGGGGGGT


S

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   26...30.........40.........50.........60.........70.........80.........90.........100.....
 
   92.......100 .........110.........120.........
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Query Sequence  TWDTQNRES. . . . . . DTAACREVWQHAKRMLADSSLDMVLLDEL
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Template Sequence  DSKDEWLGKYDIIIATAEKFDSLLRHGSSWIK. . DVKILVADEI
Template Known Secondary structure  S


GGGGG
ST
GGGG..GTG
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   106...110.........120.........130....... ..140.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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