Phyre 2 alignment of P0A9H5 with c2vf7B

Job Description P0A9H5
Confidence 90.97% Date Thu Jan 5 11:10:13 GMT 2012

Rank 84 Aligned Residues 68

% Identity 15% Template c2vf7B_

PDB info PDB header:dna-binding protein Chain: B: PDB Molecule:excinuclease abc, subunit a.; PDBTitle: crystal structure of uvra2 from deinococcus radiodurans

Resolution 2.30 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence	R	E	V	W	Q	H	A	K	R	M	L	A	D	S	S	L	D	M	V	L	L	D	E	L	T	Y	M	V	A	Y	D	Y	L	P	L	E	E	V	V	Q	A	L	N	E	.	R	P	H	Q	Q	T	V	I	I	T	G	R	G	C	H	R	D	I	L	E	L	A	D	T	V	S	E	L
Query Conservation																																													.
Alig confidence																								.	.																				.															.	.
Template Conservation																								.	.																																			.	.
Template Sequence	L	Q	R	L	R	L	A	T	Q	L	Y	S	N	L	F	G	V	V	Y	V	L	D	E	.	.	P	S	A	G	L	H	P	A	D	T	E	A	L	L	S	A	L	E	N	L	K	R	G	G	N	S	L	F	V	V	E	H	D	L	.	.	D	V	I	R	R	A	D	W	L	V	D	V
Template Known Secondary structure										T	T	S				S								.	.	T	T	T	T			T	T	S													T	T	T											.	.							S
Template Predicted Secondary structure																								.	.																																			.	.
Template SS confidence
	385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.			.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.			.	.	.	.	.	.	.	.	450	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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