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Job Description | P0A9H5 | Confidence | 95.05% | Date | Thu Jan 5 11:10:13 GMT 2012 |
Rank | 52 | Aligned Residues | 90 |
% Identity | 21% | Template | c2v3cC_ |
PDB info |
PDB header:signaling protein | Chain: C: PDB Molecule:signal recognition 54 kda protein; |
PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii
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Resolution | 2.50 Å |
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27 | . | . | 30 | . | . | . | . | . | . | |
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | R | G | I | I | I | V | F | T | G | . |
N | G | K | G | K | T | T | A | A | F | G | T | A | T | R | A | V | G | H | G | K | K | V | G | V | V | Q | F | I | K | G | T | W | P | N | G | E | R | N | L | L | E | P | H | G | V | E | F | Q | V | M | A | T | G | F | T | W | D | T | Q | N | R | E | S | D | T | A | A | C |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | K | Q | N | V | I | L | L | V | G | I | Q | G | S | G | K | T | T | T | A | A | K | L | A | R | Y | I | Q | K | R | G | L | K | P | A | L | I | . |
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A | A | D | T | Y | R | P | A | A | Y | E | Q | L | K | Q | L | A | E | K | I | H | V | P | I | Y | G | D | E | T | R | T | K | S | P | V | D | I | V |
Template Known Secondary structure |   |
S | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
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. | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
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106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
R | E | V | W | Q | H | A | K | R | M | L | A | D | S | S | L | D | M | V | L | L | D |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | E | G | M | E | K | F | K | . |
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K | A | D | V | L | I | I | D |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | S | . | . | . | . | . | . | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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173 | . | . | . | . | . | . | 180 | |
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. | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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