Job Description P0A9H5 Confidence 97.21% Date Thu Jan 5 11:10:13 GMT 2012 Rank 12 Aligned Residues 132 % Identity 20% Template c2j37W_ PDB info PDB header:ribosome Chain: W: PDB Molecule:signal recognition particle 54 kda protein PDBTitle: model of mammalian srp bound to 80s rncs Resolution 8.00 Å

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		27	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.						.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure												.																																					.	.	.	.	.
Query SS confidence												.																																					.	.	.	.	.
Query Sequence		E	R	G	I	I	I	V	F	T	G	.	N	G	K	G	K	T	T	A	A	F	G	T	A	T	R	A	V	G	H	G	K	K	V	G	V	V	Q	F	I	K	G	T	W	P	N	G	.	.	.	.	.	E	R	N	L	L	E	P	H	G	V	E	F	Q	V	M	A	T	G	F	T	W	D	T	Q	N	R	E	S
Query Conservation												.																																					.	.	.	.	.
Alig confidence												.																													.	.	.						.	.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.																										.	.	.	.	.	.	.	.
Template Sequence		T	K	G	N	V	I	M	F	V	G	L	Q	G	S	G	K	T	T	T	C	S	K	L	A	Y	Y	Y	Q	R	K	G	W	K	T	C	L	I	C	A	.	.	.	D	T	F	R	A	G	A	F	D	Q	L	K	Q	N	A	T	K	A	R	I	P	F	Y	G	S	.	.	.	.	.	.	.	.	Y	T	E	M	D
Template Known Secondary structure			S	S								S	T	T	S	S															T	T									.	.	.			S	S	S														T							.	.	.	.	.	.	.	.				S
Template Predicted Secondary structure																																									.	.	.																										.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160									.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																																		.											.	.	.
Query SS confidence																																																		.											.	.	.
Query Sequence		D	T	A	A	C	R	E	V	W	Q	H	A	K	R	M	L	A	D	S	S	L	D	M	V	L	L	D	E	L	T	Y	M	V	A	Y	D	Y	L	P	L	E	E	V	V	Q	A	L	N	.	E	R	P	H	Q	Q	T	V	I	I	.	.	.	T	G	R	G	C	H	R	D	I	L	E	L	A	D	T	V
Query Conservation																																																		.											.	.	.
Alig confidence																	.	.	.	.											.																			.											.	.	.
Template Conservation																	.	.	.	.											.
Template Sequence		P	V	I	I	A	S	E	G	V	E	K	F	K	N	E	.	.	.	.	N	F	E	I	I	I	V	D	T	S	.	G	R	H	K	Q	E	D	S	L	F	E	E	M	L	Q	V	A	N	A	I	Q	P	D	N	I	V	Y	V	M	D	A	S	I	G	Q	A	C	E	A	Q	A	K	A	F	K	D	K	V
Template Known Secondary structure																T	.	.	.	.	T										.				T	T																		S								T	T			T	T
Template Predicted Secondary structure																	.	.	.	.											.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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