Job Description P0A9H5 Confidence 95.00% Date Thu Jan 5 11:10:13 GMT 2012 Rank 53 Aligned Residues 123 % Identity 21% Template c2j289_ PDB info PDB header:ribosome Chain: 9: PDB Molecule:signal recognition particle 54; PDBTitle: model of e. coli srp bound to 70s rncs Resolution 8.0 Å

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		25	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure														.																				.																							.	.
Query SS confidence														.																				.																							.	.
Query Sequence		Q	D	E	R	G	I	I	I	V	F	T	G	.	N	G	K	G	K	T	T	A	A	F	G	T	A	T	R	A	V	G	H	.	G	K	K	V	G	V	V	Q	F	I	K	G	T	W	P	N	G	E	R	N	L	L	.	.	E	P	H	G	V	E	F	Q	V	M	A	T	G	F	T	W	D	T	Q	N	R	E	S
Query Conservation														.																				.																							.	.
Alig confidence														.																				.																							.	.											.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.
Template Sequence		A	A	Q	P	P	A	V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	.	.	.	.	.	.	.	.	D	V	G	Q	K
Template Known Secondary structure			S	S	S	S								S	S	S	S	S	S	T	T	T										T	S	S	S					B						S	S	S		S											T	T							.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.									.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		D	T	A	A	C	R	E	V	W	Q	H	A	K	R	M	L	A	D	S	S	L	D	M	V	L	L	D	E	L	T	Y	M	V	A	Y	D	Y	L	P	L	E	E	V	V	Q	A	L	N	.	E	R	P	H	Q	Q	T	V	I	I	T	G
Query Conservation																																																		.
Alig confidence																	.	.	.	.											.																			.
Template Conservation																	.	.	.	.											.
Template Sequence		P	V	D	I	V	N	A	A	L	K	E	A	K	L	K	.	.	.	.	F	Y	D	V	L	L	V	D	T	A	.	G	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A
Template Known Secondary structure		T	T													T	.	.	.	.	T		S								.				S	S																		S								T
Template Predicted Secondary structure																	.	.	.	.											.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions