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Job DescriptionP0A9H5
Confidence95.00%DateThu Jan 5 11:10:13 GMT 2012
Rank53Aligned Residues123
% Identity21%Templatec2j289_
PDB info PDB header:ribosomeChain: 9: PDB Molecule:signal recognition particle 54; PDBTitle: model of e. coli srp bound to 70s rncs
Resolution8.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30...... ...40.........50..... ....60.........70....... ..80.........90.........100
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Query Sequence  QDERGIIIVFTG. NGKGKTTAAFGTATRAVGH. GKKVGVVQFIKGTWPNGERNLL. . EPHGVEFQVMATGFTWDTQNRES
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Template Sequence  AAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPS. . . . . . . . DVGQK
Template Known Secondary structure 
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   96...100.........110.........120.........130.........140.........150.........160.. .....
 
   101........110.........120.........130.........140........ .150.........160
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Query Sequence  DTAACREVWQHAKRMLADSSLDMVLLDELTYMVAYDYLPLEEVVQALN. ERPHQQTVIITG
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Template Sequence  PVDIVNAALKEAKLK. . . . FYDVLLVDTA. GRLHVDEAMMDEIKQVHASINPVETLFVVDA
Template Known Secondary structure  TTT....T
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   168.170.........180.. .......190.. .......200.........210.........220...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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