Job Description P0A9H5 Confidence 96.62% Date Thu Jan 5 11:10:13 GMT 2012 Rank 24 Aligned Residues 80 % Identity 28% Template c2iy3A_ PDB info PDB header:rna-binding Chain: A: PDB Molecule:signal recognition particle protein ffh; PDBTitle: structure of the e. coli signal recognition particle2 bound to a translating ribosome Resolution 16.00 Å

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		31	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80								.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure								.																																													.	.	.	.	.	.	.
Query SS confidence								.																																													.	.	.	.	.	.	.
Query Sequence		I	I	V	F	T	G	.	N	G	K	G	K	T	T	A	A	F	G	T	A	T	R	A	V	G	H	G	K	K	V	G	V	V	Q	F	I	K	G	T	W	P	N	G	E	R	N	L	L	E	P	H	.	.	.	.	.	.	.	G	V	E	F	Q	V	M	A	T	G	F	T	W	D	T	Q	N	R	E	S	D	T
Query Conservation								.																																													.	.	.	.	.	.	.
Alig confidence								.																											.	.	.	.	.														.	.	.	.	.	.	.								.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.																												.	.	.	.	.	.	.	.
Template Sequence		L	W	F	L	V	G	L	Q	G	S	G	K	T	T	T	A	A	K	L	A	L	Y	Y	K	G	K	G	R	R	P	L	L	V	.	.	.	.	.	A	A	D	T	Q	R	P	A	A	R	E	Q	L	R	L	L	G	E	K	V	G	V	P	V	L	E	V	.	.	.	.	.	.	.	.	M	D	G	E	S	P	E
Template Known Secondary structure									T	T	S	S															T	T							.	.	.	.	.				S	S																T							.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																																			.	.	.	.	.																												.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.									160	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	C	R	E	V	W	Q	H	A	K	R	M	L	A	D	S	S	L	D	M	V	L	L	D
Query Conservation
Alig confidence															.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		S	I	R	R	R	V	E	E	K	A	R	L	E	.	.	.	.	A	R	D	L	I	L	V	D
Template Known Secondary structure															.	.	.	.	T		S
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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