Job Description P0A9H5 Confidence 96.67% Date Thu Jan 5 11:10:13 GMT 2012 Rank 22 Aligned Residues 111 % Identity 29% Template c1w4rC_ PDB info PDB header:transferase Chain: C: PDB Molecule:thymidine kinase; PDBTitle: structure of a type ii thymidine kinase with bound dttp Resolution 1.83 Å

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		28	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		R	G	I	I	I	V	F	T	G	.	N	G	K	G	K	T	T	A	A	F	G	T	A	T	R	A	V	G	H	G	K	K	V	G	V	V	Q	F	I	K	G	T	W	P	N	G	E	R	N	L	L	E	P	H	G	V	E	F	Q	V	M	A	T	G	F	T	W	D	T	Q	N	R	E	S	D	T	A	A	C	R
Query Conservation											.
Alig confidence											.																															.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	Q	I	Q	V	I	L	G	P	M	F	S	G	K	S	T	E	L	M	R	R	V	R	R	F	Q	I	A	Q	Y	K	C	L	V	I	K	Y	A	K	.	D	T	R	A	L	P	A	C	L	L	R	D	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												T	T	S															T	T	T									T	T	.								S	S	G	G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.										.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.
Query Sequence		E	V	W	Q	H	A	K	R	M	L	A	D	S	S	L	D	M	V	L	L	D	E	L	T	Y	M	V	A	Y	D	Y	L	P	L	E	E	V	V	Q	A	L	N	E	R	P	H	Q	Q	T	V	I	I	T	G	R	.	.	.	.	.	.	.	.	.	G	C	H	R	D	I	L	E	L	A	D	T	V	S	E	L
Query Conservation																																																									.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																		.	.	.		.	.													.	.										.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																		.	.	.		.	.													.	.
Template Sequence		.	.	.	.	.	.	.	.	.	Q	E	A	L	G	V	A	V	I	G	I	D	E	G	Q	F	F	.	.	.	P	.	.	D	I	V	E	F	C	E	A	M	A	N	A	.	.	G	K	T	V	I	V	A	A	L	D	G	T	F	Q	R	K	P	F	G	A	I	L	N	L	V	P	L	A	E	S	V	V	K	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.					T		S						S	G	G	G		.	.	.	T	.	.	T											T	.	.	T									S	B		T	T	S	S	B		T	T	G	G	G	G	G	G	G		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																		.	.	.		.	.													.	.
Template SS confidence
											86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.			.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		178	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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