Job Description P0A9H5 Confidence 96.02% Date Thu Jan 5 11:10:13 GMT 2012 Rank 41 Aligned Residues 91 % Identity 24% Template c1qzwC_ PDB info PDB header:signaling protein/rna Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the complete core of archaeal srp and2 implications for inter-domain communication Resolution 4.10 Å

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		25	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure														.																																										.	.
Query SS confidence														.																																										.	.
Query Sequence		Q	D	E	R	G	I	I	I	V	F	T	G	.	N	G	K	G	K	T	T	A	A	F	G	T	A	T	R	A	V	G	H	G	K	K	V	G	V	V	Q	F	I	K	G	T	W	P	N	G	E	R	N	L	L	.	.	E	P	H	G	V	E	F	Q	V	M	A	T	G	F	T	W	D	T	Q	N	R	E	S	D
Query Conservation														.																																										.	.
Alig confidence														.																																										.	.											.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.
Template Sequence		P	T	K	L	P	F	I	I	M	L	V	G	V	Q	G	S	G	K	T	T	T	A	G	K	L	A	Y	F	Y	K	K	R	G	Y	K	V	G	L	V	A	A	D	V	Y	R	P	A	A	Y	D	Q	L	L	Q	L	G	N	Q	I	G	V	Q	V	Y	G	E	.	.	.	.	.	.	.	.	P	N	N	Q	N	P
Template Known Secondary structure			S	S	S	S								S	S	S	S	S	S	T	T	T										T	T	S					B						S	S	S		S											T	T							.	.	.	.	.	.	.	.	S	S				T
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.									.	.	160	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	A	C	R	E	V	W	Q	H	A	K	R	M	L	A	D	S	S	L	D	M	V	L	L	D
Query Conservation
Alig confidence																.	.	.	.
Template Conservation																.	.	.	.
Template Sequence		I	E	I	A	K	K	G	V	D	I	F	V	K	N	.	.	.	.	K	M	D	I	I	I	V	D
Template Known Secondary structure		T													T	.	.	.	.	T		S
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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