Job Description P0A9H5 Confidence 92.87% Date Thu Jan 5 11:10:13 GMT 2012 Rank 66 Aligned Residues 133 % Identity 18% Template c1j8yF_ PDB info PDB header:signaling protein Chain: F: PDB Molecule:signal recognition 54 kda protein; PDBTitle: signal recognition particle conserved gtpase domain from a.2 ambivalens t112a mutant Resolution 2.00 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		Q	D	E	R	G	I	I	I	V	F	T	G	N	G	K	G	K	T	T	A	A	F	G	T	A	T	R	A	V	G	H	G	K	K	V	G	V	V	Q	F	I	K	G	T	W	P	N	G	E	R	N	L	L	.	.	E	P	H	G	V	E	F	Q	V	M	A	T	G	F	T	W	D	T	Q	N	R	E	S	D	T
Query Conservation																																																							.	.
Alig confidence															.			.					.																																.	.											.	.	.	.	.	.	.	.
Template Conservation															.			.					.																																												.	.	.	.	.	.	.	.
Template Sequence		P	D	K	I	P	Y	V	I	M	L	V	G	V	.	Q	G	.	T	T	A	G	.	K	L	A	Y	F	Y	K	K	K	G	F	K	V	G	L	V	G	A	D	V	Y	R	P	A	A	L	E	Q	L	Q	Q	L	G	Q	Q	I	G	V	P	V	Y	G	E	.	.	.	.	.	.	.	.	P	G	E	K	D	V	V
Template Known Secondary structure			S	S	S	S								S	.			.					.									T	T											S	S															T							.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure															.			.					.																																												.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.		.	.		.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.									.	.	.	.	160	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																.																	.
Query SS confidence																																.																	.
Query Sequence		A	A	C	R	E	V	W	Q	H	A	K	R	M	L	A	D	S	S	L	D	M	V	L	L	D	E	L	T	Y	M	.	V	A	Y	D	Y	L	P	L	E	E	V	V	Q	A	L	N	.	E	R	P	H	Q	Q	T	V	I	I	T	G	R	G	C	H	R	D	I	L	E	L	A	D
Query Conservation																																.																	.
Alig confidence															.	.	.	.														.																	.
Template Conservation															.	.	.	.
Template Sequence		G	I	A	K	R	G	V	E	K	F	L	S	E	.	.	.	.	K	M	E	I	I	I	V	D	T	A	G	R	H	G	Y	G	E	E	A	A	L	L	E	E	M	K	N	I	Y	E	A	I	K	P	D	E	V	T	L	V	I	D	A	S	I	G	Q	K	A	Y	D	L	A	S	K
Template Known Secondary structure														T	.	.	.	.	T		S									S			T	T																			S								G	G	G	G	G	G
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions